This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Acyl-CoA dehydrogenase
From Proteopedia
(Difference between revisions)
| Line 19: | Line 19: | ||
[[Acyl-CoA dehydrogenase 3D structures]] | [[Acyl-CoA dehydrogenase 3D structures]] | ||
</StructureSection> | </StructureSection> | ||
| - | ==3D structures of acyl-CoA dehydrogenase== | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | |||
| - | *Short chain ACDH | ||
| - | |||
| - | **[[1jqi]] - SCAD + acetoacetyl-CoA + FAD – rat<BR /> | ||
| - | **[[2dvl]], [[2z1q]] - TtSCAD + FAD – ''Thermus thermophilus''<BR /> | ||
| - | **[[2jif]], [[2vig]] - hSCAD + CoA persulfide + FAD – human<br /> | ||
| - | **[[5ol2]] – ACDH + FAD + CoA persulfide + electron transfer flavoprotein – ''Clostridium difficile''<br /> | ||
| - | |||
| - | *Medium chain ACDH | ||
| - | |||
| - | **[[1ws9]], [[2cx9]] - TtMCAD <BR /> | ||
| - | **[[3mdd]] – pMCAD + FAD – pig<BR /> | ||
| - | **[[1egd]], [[1ege]], [[4p13]] - hMCAD (mutant) + FAD<BR /> | ||
| - | **[[1ukw]], [[2d29]] - TtMCAD + FAD<BR /> | ||
| - | **[[1egc]] - hMCAD (mutant) + octanoyl-CoA + FAD<BR /> | ||
| - | **[[3mde]] - pMCAD + octanoyl-CoA + FAD<BR /> | ||
| - | **[[1udy]] - pMCAD + thiaoctanoyl-CoA + FAD<BR /> | ||
| - | **[[1t9g]] - hMCAD + electron transfer flavoprotein + AMP + FAD<BR /> | ||
| - | **[[2a1t]] - hMCAD + electron transfer flavoprotein (mutant) + AMP + FAD<BR /> | ||
| - | |||
| - | *Very long chain ACDH | ||
| - | |||
| - | **[[2uxw]] - hVLCAD + tetradecanoyl CoA + FAD<BR /> | ||
| - | **[[3b96]] - hVLCAD + trans-δ2-palmitenoyl CoA + FAD<BR /> | ||
| - | |||
| - | *Unspecified length ACDH | ||
| - | |||
| - | **[[2oku]] – ACDH C terminal – ''Porphyromonas gingivalis''<BR /> | ||
| - | **[[2pg0]] - ACDH + FAD – ''Geobacillus kaustophilus''<BR /> | ||
| - | **[[2wbi]] – hACDH 11 + FAD<BR /> | ||
| - | **[[3nf4]], [[3pfd]] – ACHD + FAD – ''Mycobacterium thermoresistibile''<BR /> | ||
| - | **[[3oib]], [[4iv6]] - ACHD + FAD – ''Mycobacterium smegmatis''<br /> | ||
| - | **[[4x28]] - ACHD + FAD – ''Mycobacterium tuberculosis''<br /> | ||
| - | **[[4m9a]] – ACDH + FAD – ''Burkholderia thailandensis''<br /> | ||
| - | **[[3owa]] - ACDH + FAD – ''Bacillus anthracis''<br /> | ||
| - | **[[4rm7]] – ShACDH – ''Slackia heliotrinireducens''<br /> | ||
| - | **[[4w9u]] – ACDH – ''Brucella abortus''<br /> | ||
| - | **[[5ez3]] – ACDH + FAD – ''Brucella melitensis''<br /> | ||
| - | **[[4y9l]] – CeACDH + FAD – ''Caenorhabditis elegans''<br /> | ||
| - | **[[4y9j]] – CeACDH + FAD + CoA-11<br /> | ||
| - | **[[5af7]] – AmACDH + FAD – ''Advenella mimigardefordensis''<br /> | ||
| - | **[[5ahs]] – AmACDH + FAD + succinyl-CoA<br /> | ||
| - | **[[5lnx]] – ACDH + FAD – ''Bacillus subtilis''<br /> | ||
| - | **[[6es9]] – ACDH + FAD + CoA – ''Paracoccus denitrificans''<br /> | ||
| - | **[[4y9l]] – CeACDH + FAD – ''Caenorhabditis elegans''<br /> | ||
| - | **[[4y9j]] – CeACDH + FAD + undecanoyl-CoA <br /> | ||
| - | |||
| - | *Butyryl-CoA dehydrogenase | ||
| - | |||
| - | **[[4u83]] – ShBCDH <br /> | ||
| - | **[[1buc]] – BCDH + acetoacetyl-CoA + FAD – ''Megasphaera elsdenii''<br /> | ||
| - | **[[1rx0]] – hiso-BCDH + methacrylyl-CoA + FAD <br /> | ||
| - | **[[6cy8]], [[6cxt]] – BCDH + alpha/beta hydrolase fold protein + FAD – ''Marinomonas mediterranea''<br /> | ||
| - | |||
| - | |||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:42, 27 February 2019
| |||||||||||
References
- ↑ Thorpe C, Kim JJ. Structure and mechanism of action of the acyl-CoA dehydrogenases. FASEB J. 1995 Jun;9(9):718-25. PMID:7601336
- ↑ Battaile KP, Molin-Case J, Paschke R, Wang M, Bennett D, Vockley J, Kim JJ. Crystal structure of rat short chain acyl-CoA dehydrogenase complexed with acetoacetyl-CoA: comparison with other acyl-CoA dehydrogenases. J Biol Chem. 2002 Apr 5;277(14):12200-7. Epub 2002 Jan 25. PMID:11812788 doi:10.1074/jbc.M111296200
