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6i7w

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Current revision (11:48, 24 January 2024) (edit) (undo)
 
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==Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58==
==Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58==
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<StructureSection load='6i7w' size='340' side='right' caption='[[6i7w]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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<StructureSection load='6i7w' size='340' side='right'caption='[[6i7w]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6i7w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I7W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6I7W FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6i7w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6I7W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6I7W FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=H6Q:[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]+[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]+hydrogen+phosphate'>H6Q</scene>, <scene name='pdbligand=H6Z:[(2~{S})-1,1-bis(oxidanyl)propan-2-yl]+[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]+hydrogen+phosphate'>H6Z</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ra1|4ra1]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=H6Q:2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucopyranose'>H6Q</scene>, <scene name='pdbligand=H6Z:2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-alpha-D-glucopyranose'>H6Z</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">accA, Atu6139 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6i7w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i7w OCA], [https://pdbe.org/6i7w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6i7w RCSB], [https://www.ebi.ac.uk/pdbsum/6i7w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6i7w ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6i7w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6i7w OCA], [http://pdbe.org/6i7w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6i7w RCSB], [http://www.ebi.ac.uk/pdbsum/6i7w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6i7w ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q52012_AGRFC Q52012_AGRFC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Agrfc]]
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[[Category: Agrobacterium fabrum str. C58]]
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[[Category: Morera, S]]
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[[Category: Large Structures]]
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[[Category: Sahili, A El]]
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[[Category: El Sahili A]]
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[[Category: Vigouroux, A]]
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[[Category: Morera S]]
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[[Category: Transport protein]]
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[[Category: Vigouroux A]]

Current revision

Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58

PDB ID 6i7w

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