6eb9

From Proteopedia

(Difference between revisions)

Revision as of 08:12, 3 April 2019

Crystal Structure of the Nipah Virus Phosphoprotein Multimerization Domain Delta 542-544

Structural highlights

6eb9 is a 1 chain structure with sequence from Nipav. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:	P/V/C (NIPAV)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[PHOSP_NIPAV] Essential component of the RNA polymerase transcription and replication complex. Binds the viral ribonucleocapsid and positions the L polymerase on the template (By similarity). May play a role to prevent the establishment of cellular antiviral state by binding to host STAT1 in the cytoplasm. This activity is not as strong as that of V and W.

Publication Abstract from PubMed

Nipah virus is a highly lethal zoonotic pathogen found in Southeast Asia that has caused human encephalitis outbreaks with 40%-70% mortality. NiV encodes its own RNA-dependent RNA polymerase within the large protein, L. Efficient polymerase activity requires the phosphoprotein, P, which tethers L to its template, the viral nucleocapsid. P is a multifunctional protein with modular domains. The central P multimerization domain is composed of a long, tetrameric coiled coil. We investigated the importance of structural features found in this domain for polymerase function using a newly constructed NiV bicistronic minigenome assay. We identified a conserved basic patch and central kink in the coiled coil that are important for polymerase function, with R555 being absolutely essential. This basic patch and central kink are conserved in the related human pathogens measles and mumps viruses, suggesting that this mechanism may be conserved.

A Conserved Basic Patch and Central Kink in the Nipah Virus Phosphoprotein Multimerization Domain Are Essential for Polymerase Function.,Bruhn JF, Hotard AL, Spiropoulou CF, Lo MK, Saphire EO Structure. 2019 Feb 13. pii: S0969-2126(19)30012-7. doi:, 10.1016/j.str.2019.01.012. PMID:30799076^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Bruhn JF, Hotard AL, Spiropoulou CF, Lo MK, Saphire EO. A Conserved Basic Patch and Central Kink in the Nipah Virus Phosphoprotein Multimerization Domain Are Essential for Polymerase Function. Structure. 2019 Feb 13. pii: S0969-2126(19)30012-7. doi:, 10.1016/j.str.2019.01.012. PMID:30799076 doi:http://dx.doi.org/10.1016/j.str.2019.01.012

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6eb9"

@@ Line 1: / Line 1: @@
-==Crystal Structure of the Nipah Virus Phosphoprotein Multimerization Domain G519N==
+==Crystal Structure of the Nipah Virus Phosphoprotein Multimerization Domain Delta 542-544==
 <StructureSection load='6eb9' size='340' side='right'caption='[[6eb9]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6eb9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EB9 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6eb9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nipav Nipav]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EB9 FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6eb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eb9 OCA], [http://pdbe.org/6eb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6eb9 RCSB], [http://www.ebi.ac.uk/pdbsum/6eb9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6eb9 ProSAT]</span></td></tr>
+</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">P/V/C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=121791 NIPAV])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6eb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eb9 OCA], [http://pdbe.org/6eb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6eb9 RCSB], [http://www.ebi.ac.uk/pdbsum/6eb9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6eb9 ProSAT]</span></td></tr>
 </table>
 == Function ==
@@ Line 22: / Line 23: @@
 </StructureSection>
 [[Category: Large Structures]]
+[[Category: Nipav]]
 [[Category: Bruhn, J F]]
 [[Category: Saphire, E O]]

6eb9

From Proteopedia

Revision as of 08:12, 3 April 2019

Crystal Structure of the Nipah Virus Phosphoprotein Multimerization Domain Delta 542-544

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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