Arabinanase

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 15: Line 15:
</StructureSection>
</StructureSection>
- 
-
== 3D Structures of Arabinanase ==
 
- 
-
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
-
{{#tree:id=OrganizedByTopic|openlevels=0|
 
- 
-
*Endo-arabinanase
 
- 
-
**[[2x8f]], [[1uv4]] – BsEndo-Ara – ''Bacillus subtilis''<br />
 
-
**[[2x8t]], [[4cot]] - BsEndo-Ara (mutant) <br />
 
-
**[[3cu9]], [[1wl7]], [[5ho0]], [[5ho2]], [[5hp6]] – GsEndo-Ara – ''Geobacillus stearothermophilus''<br />
 
-
**[[3d5y]], [[3d60]] - GsEndo-Ara (mutant) <br />
 
-
**[[1gyd]] – CcEndo-Ara – ''Cellvibrio cellulose''<br />
 
-
**[[1gyh]] - CcEndo-Ara (mutant)<br />
 
-
**[[4kc7]], [[4kc8]] - TpEndo-Ara – ''Thermotoga petrophila''<br />
 
-
**[[4kca]], [[4kcb]] - Endo-Ara – bovine<br />
 
-
**[[6b7k]] - Endo-Ara – ''Bacillus licheniformis''<br />
 
- 
-
*Endo-arabinanase complex with substrate
 
- 
-
**[[1gye]] - CcEndo-Ara (mutant) + arabinohexaose<br />
 
-
**[[3d5z]], [[3d61]] - GsEndo-Ara (mutant) + arabinotriose<br />
 
-
**[[5ho9]] - GsEndo-Ara + arabinooctaose<br />
 
-
**[[5hof]], [[6f1g]] - GsEndo-Ara + arabinopentaose<br />
 
-
**[[5hon]] - GsEndo-Ara + arabinotriose<br />
 
-
**[[2x8s]] - BsEndo-Ara (mutant) + arabinotriose<br />
 
-
**[[6a8h]] - GtEndo-Ara (mutant) + arabinotriose – ''Geobacillus thermodenitrificans''<br />
 
-
**[[6a8i]] - GtEndo-Ara (mutant) + arabinohexaose <br />
 
- 
-
*Exo-arabinanase
 
- 
-
**[[3a71]] – PcExo-Ara residues 24-378 – ''Penicillium chrysogenum''<br />
 
-
**[[2w5n]] – GzExo-Ara – ''Gibberella zeae''
 
- 
-
*Exo-arabinanase complex with substrate
 
- 
-
**[[3a72]] - PcExo-Ara residues 24-378 + arabinobiose<br />
 
-
**[[2w5o]] - GzExo-Ara + arabinobiose<br />
 
- 
-
}}
 
== References ==
== References ==

Revision as of 11:12, 19 March 2019

Endo-arabinanase complex with arabinohexose (yellow) and Cl- ion (green) (PDB code 1gye)

Drag the structure with the mouse to rotate

References

  1. Alhassid A, Ben-David A, Tabachnikov O, Libster D, Naveh E, Zolotnitsky G, Shoham Y, Shoham G. Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate. Biochem J. 2009 Jul 29;422(1):73-82. PMID:19505290 doi:10.1042/BJ20090180
  2. Nurizzo D, Turkenburg JP, Charnock SJ, Roberts SM, Dodson EJ, McKie VA, Taylor EJ, Gilbert HJ, Davies GJ. Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold. Nat Struct Biol. 2002 Sep;9(9):665-8. PMID:12198486 doi:10.1038/nsb835

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

Personal tools