This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Alcohol dehydrogenase 3D structures
From Proteopedia
(Difference between revisions)
| Line 72: | Line 72: | ||
**[[1d1t]] - hADH IV σ chain (mutant) + NAD<br /> | **[[1d1t]] - hADH IV σ chain (mutant) + NAD<br /> | ||
**[[2jhf]], [[2jhg]], [[1het]], [[1heu]], [[1hf3]], [[1ee2]], [[2oxi]], [[2ohx]], [[6adh]] - hoADH IV e chain + NAD<br /> | **[[2jhf]], [[2jhg]], [[1het]], [[1heu]], [[1hf3]], [[1ee2]], [[2oxi]], [[2ohx]], [[6adh]] - hoADH IV e chain + NAD<br /> | ||
| + | **[[6nbb]] - hoADH IV e chain + NAD – Cryo EM<br /> | ||
**[[1adb]], [[1adc]], [[1adf]], [[1adg]], [[7adh]], [[5vn1]] - hoADH IV e chain + NAD derivative<br /> | **[[1adb]], [[1adc]], [[1adf]], [[1adg]], [[7adh]], [[5vn1]] - hoADH IV e chain + NAD derivative<br /> | ||
**[[1mgo]], [[1ju9]], [[1qlh]], [[1a72]] - hoADH IV e chain (mutant) + NAD<br /> | **[[1mgo]], [[1ju9]], [[1qlh]], [[1a72]] - hoADH IV e chain (mutant) + NAD<br /> | ||
| Line 77: | Line 78: | ||
*ADH IV ternary complex | *ADH IV ternary complex | ||
| - | **[[3oq6]], [[1qv6]], [[1qv7]], [[1a71]], [[1axe]], [[1axg]], [[4nfh]], [[4nfs]], [[4ng5]], [[5kje]], [[5kjc]], [[5kj6]], [[5kj1]], [[5kcz]], [[5kcp]], [[5cdt]], [[5cds]], [[5cdg]] – hoADH IV e chain (mutant) + NAD + alcohol<br /> | + | **[[3oq6]], [[1qv6]], [[1qv7]], [[1a71]], [[1axe]], [[1axg]], [[4nfh]], [[4nfs]], [[4ng5]], [[5kje]], [[5kjc]], [[5kj6]], [[5kj1]], [[5kcz]], [[5kcp]], [[5cdt]], [[5cds]], [[5cdg]], [[6o91]], [[6oa7]], [[6owm]], [[6owp]] – hoADH IV e chain (mutant) + NAD + alcohol<br /> |
**[[4dwv]], [[4dxh]], [[5kjf]] - hoADH IV e chain + NAD + alcohol<br /> | **[[4dwv]], [[4dxh]], [[5kjf]] - hoADH IV e chain + NAD + alcohol<br /> | ||
**[[1p1r]], [[1ldy]], [[1lde]] - hoADH IV e chain + NADH + formamide derivative<br /> | **[[1p1r]], [[1ldy]], [[1lde]] - hoADH IV e chain + NADH + formamide derivative<br /> | ||
| Line 102: | Line 103: | ||
**[[3gaz]] – ADH residues 2-334 – ''Novosphingobium aromaticivorans''<br /> | **[[3gaz]] – ADH residues 2-334 – ''Novosphingobium aromaticivorans''<br /> | ||
**[[2eih]] – ADH – ''Thermus thermophilus''<br /> | **[[2eih]] – ADH – ''Thermus thermophilus''<br /> | ||
| - | **[[1rjw]] – GsADH – ''Geobacillus stearothermophilus''<br /> | + | **[[1rjw]], [[6iqd]] – GsADH – ''Geobacillus stearothermophilus''<br /> |
**[[1vj0]], [[1vhd]] – TmADH -''Thermotoga maritima''<br /> | **[[1vj0]], [[1vhd]] – TmADH -''Thermotoga maritima''<br /> | ||
**[[2eer]] – ADH – ''Sulfolobus tokodaii''<br /> | **[[2eer]] – ADH – ''Sulfolobus tokodaii''<br /> | ||
| Line 125: | Line 126: | ||
**[[3jzd]] – ReADH + NAD<br /> | **[[3jzd]] – ReADH + NAD<br /> | ||
**[[4rqt]] - AtADH P + Zn – ''Arabidopsis thaliana'' <br /> | **[[4rqt]] - AtADH P + Zn – ''Arabidopsis thaliana'' <br /> | ||
| + | **[[7bu2]] – EcADH + Zn – ''Escherichia coli''<br /> | ||
| + | **[[6qhe]] – ADH + NAD – ''Arthrobacter''<br /> | ||
*ADH ternary complex | *ADH ternary complex | ||
| Line 137: | Line 140: | ||
**[[3s2e]] – ReADH + NAD + Zn<br /> | **[[3s2e]] – ReADH + NAD + Zn<br /> | ||
**[[3s2f]], [[3s2g]] – ReADH + NAD + Zn + furfural<br /> | **[[3s2f]], [[3s2g]] – ReADH + NAD + Zn + furfural<br /> | ||
| - | **[[4gkv]] – EcADH + NAD + Zn + peptide – | + | **[[4gkv]] – EcADH + NAD + Zn + peptide<br /> |
| + | **[[7bu3]] – EcADH + NADP + Zn + Asp <br /> | ||
**[[5vm2]] – EcADH + Mg + Zn<br /> | **[[5vm2]] – EcADH + Mg + Zn<br /> | ||
**[[4jji]], [[4gl4]], [[3uko]], [[4rqu]] - AtADH III + NAD + Zn <br /> | **[[4jji]], [[4gl4]], [[3uko]], [[4rqu]] - AtADH III + NAD + Zn <br /> | ||
| Line 181: | Line 185: | ||
**[[1nxq]], [[6h07]], [[6h1m]] - LbRADH – ''Lactobacillus brevis''<br /> | **[[1nxq]], [[6h07]], [[6h1m]] - LbRADH – ''Lactobacillus brevis''<br /> | ||
| - | **[[1zk2]], [[1zk3]], [[6hlf]] - LbRADH (mutant)<br /> | + | **[[1zk2]], [[1zk3]], [[6hlf]], [[6y0z]], [[6y10]], [[6y15]], [[6y1b]], [[6y1c]] - LbRADH (mutant)<br /> |
**[[1zjy]], [[1zjz]], [[1zk0]], [[1zk1]] – LbRADH (mutant) + NADH + alcohol<br /> | **[[1zjy]], [[1zjz]], [[1zk0]], [[1zk1]] – LbRADH (mutant) + NADH + alcohol<br /> | ||
**[[1zk4]] - LbRADH (mutant) + NADH + acetophenone<br /> | **[[1zk4]] - LbRADH (mutant) + NADH + acetophenone<br /> | ||
Revision as of 09:49, 1 June 2020
3D Structures of Alcohol dehydrogenase
Updated on 01-June-2020
