This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6qo3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6qo3 is ON HOLD until Paper Publication
+
==Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 2 (5-Amino-3-(2-thienyl) pyrazole)==
-
 
+
<StructureSection load='6qo3' size='340' side='right'caption='[[6qo3]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
Authors: Thomas, S.E., Whitehouse, A.J., Coyne, A.G., Abell, C., Mendes, V., Blundell, T.L.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6qo3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QO3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QO3 FirstGlance]. <br>
-
Description: Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 2 (5-Amino-3-(2-thienyl) pyrazole)
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=J9N:5-thiophen-2-yl-4~{H}-pyrazol-3-amine'>J9N</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6nvr|6nvr]]</td></tr>
-
[[Category: Blundell, T.L]]
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(guanine(37)-N(1))-methyltransferase tRNA (guanine(37)-N(1))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.228 2.1.1.228] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qo3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qo3 OCA], [http://pdbe.org/6qo3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qo3 RCSB], [http://www.ebi.ac.uk/pdbsum/6qo3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qo3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/B1MDI3_MYCA9 B1MDI3_MYCA9]] Specifically methylates guanosine-37 in various tRNAs.[HAMAP-Rule:MF_00605][RuleBase:RU003464][SAAS:SAAS00040552]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Abell, C]]
 +
[[Category: Blundell, T L]]
 +
[[Category: Coyne, A G]]
[[Category: Mendes, V]]
[[Category: Mendes, V]]
-
[[Category: Thomas, S.E]]
+
[[Category: Thomas, S E]]
-
[[Category: Abell, C]]
+
[[Category: Whitehouse, A J]]
-
[[Category: Whitehouse, A.J]]
+
[[Category: Spout methyltransferase]]
-
[[Category: Coyne, A.G]]
+
[[Category: Transferase]]
 +
[[Category: Trmd]]
 +
[[Category: Trna methyltransferase]]

Revision as of 06:46, 4 March 2020

Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 2 (5-Amino-3-(2-thienyl) pyrazole)

PDB ID 6qo3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools