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5u08

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Current revision (13:17, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5u08' size='340' side='right'caption='[[5u08]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
<StructureSection load='5u08' size='340' side='right'caption='[[5u08]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5u08]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultivated_bacterium Uncultivated bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U08 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U08 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5u08]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U08 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SIS:(1S,2S,3R,4S,6R)-4,6-DIAMINO-3-{[(2S,3R)-3-AMINO-6-(AMINOMETHYL)-3,4-DIHYDRO-2H-PYRAN-2-YL]OXY}-2-HYDROXYCYCLOHEXYL+3-DEOXY-4-C-METHYL-3-(METHYLAMINO)-BETA-L-ARABINOPYRANOSIDE'>SIS</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.52&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5hmn|5hmn]], [[5f46|5f46]], [[5f48|5f48]], [[5f47|5f47]], [[5f49|5f49]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SIS:(1S,2S,3R,4S,6R)-4,6-DIAMINO-3-{[(2S,3R)-3-AMINO-6-(AMINOMETHYL)-3,4-DIHYDRO-2H-PYRAN-2-YL]OXY}-2-HYDROXYCYCLOHEXYL+3-DEOXY-4-C-METHYL-3-(METHYLAMINO)-BETA-L-ARABINOPYRANOSIDE'>SIS</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u08 OCA], [http://pdbe.org/5u08 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u08 RCSB], [http://www.ebi.ac.uk/pdbsum/5u08 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u08 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u08 OCA], [https://pdbe.org/5u08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u08 RCSB], [https://www.ebi.ac.uk/pdbsum/5u08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u08 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A059WZ16_9BACT A0A059WZ16_9BACT]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Uncultivated bacterium]]
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[[Category: Uncultured bacterium]]
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[[Category: Anderson, W F]]
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[[Category: Anderson WF]]
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[[Category: Structural genomic]]
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[[Category: Savchenko A]]
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[[Category: Savchenko, A]]
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[[Category: Skarina T]]
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[[Category: Skarina, T]]
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[[Category: Stogios PJ]]
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[[Category: Stogios, P J]]
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[[Category: Wawrzak Z]]
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[[Category: Wawrzak, Z]]
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[[Category: Xu Z]]
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[[Category: Xu, Z]]
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[[Category: Yim V]]
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[[Category: Yim, V]]
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[[Category: Acetyltransferase]]
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[[Category: Aminoglycoside]]
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[[Category: Antibiotic resistance]]
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[[Category: Coenzyme some]]
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[[Category: Csgid]]
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[[Category: Gcn5-n-acetyltransferase fold]]
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[[Category: Gnat fold]]
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[[Category: Metagenome]]
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[[Category: Sisomicin]]
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[[Category: Soil]]
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[[Category: Transferase-antibiotic complex]]
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Current revision

Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with sisomicin

PDB ID 5u08

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