This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ncm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4ncm' size='340' side='right'caption='[[4ncm]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
<StructureSection load='4ncm' size='340' side='right'caption='[[4ncm]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ncm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/I75a3 I75a3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NCM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NCM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ncm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/Victoria/3/1975(H3N2)) Influenza A virus (A/Victoria/3/1975(H3N2))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NCM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NCM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=704:N~2~-[2-(5-CHLORO-1H-PYRROLO[2,3-B]PYRIDIN-3-YL)-5-FLUOROPYRIMIDIN-4-YL]-N,N-DIMETHYL-L-ALANINAMIDE'>704</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=704:N~2~-[2-(5-CHLORO-1H-PYRROLO[2,3-B]PYRIDIN-3-YL)-5-FLUOROPYRIMIDIN-4-YL]-N,N-DIMETHYL-L-ALANINAMIDE'>704</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4nce|4nce]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ncm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ncm OCA], [https://pdbe.org/4ncm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ncm RCSB], [https://www.ebi.ac.uk/pdbsum/4ncm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ncm ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PB2, polymerase basic protein 2 PB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=392809 I75A3])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ncm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ncm OCA], [http://pdbe.org/4ncm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ncm RCSB], [http://www.ebi.ac.uk/pdbsum/4ncm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ncm ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PB2_I75A3 PB2_I75A3]] Involved in transcription initiation and cap-stealing mechanism, in which cellular capped pre-mRNA are used to generate primers for viral transcription. Binds the cap of the target pre-RNA which is subsequently cleaved by PB1. May play a role in genome replication (By similarity).
+
[https://www.uniprot.org/uniprot/PB2_I75A3 PB2_I75A3] Involved in transcription initiation and cap-stealing mechanism, in which cellular capped pre-mRNA are used to generate primers for viral transcription. Binds the cap of the target pre-RNA which is subsequently cleaved by PB1. May play a role in genome replication (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:
==See Also==
==See Also==
-
*[[RNA polymerase|RNA polymerase]]
+
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: I75a3]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jacobs, M D]]
+
[[Category: Jacobs MD]]
-
[[Category: Cap-binding domain]]
+
-
[[Category: Influenza virus]]
+
-
[[Category: Pb2 subunit]]
+
-
[[Category: Rna-dependent rna polymerase]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription-transcription inhibitor complex]]
+

Revision as of 08:22, 11 January 2023

Influenza polymerase basic protein 2 (PB2) bound to a small-molecule inhibitor

PDB ID 4ncm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools