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| <StructureSection load='4nui' size='340' side='right'caption='[[4nui]], [[Resolution|resolution]] 1.70Å' scene=''> | | <StructureSection load='4nui' size='340' side='right'caption='[[4nui]], [[Resolution|resolution]] 1.70Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4nui]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_hookworm Human hookworm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NUI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NUI FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4nui]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Necator_americanus Necator americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NUI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NUI FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4nuk|4nuk]], [[4nun|4nun]], [[4nuo|4nuo]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nui OCA], [https://pdbe.org/4nui PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nui RCSB], [https://www.ebi.ac.uk/pdbsum/4nui PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nui ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ASP2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=51031 Human hookworm])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nui OCA], [http://pdbe.org/4nui PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nui RCSB], [http://www.ebi.ac.uk/pdbsum/4nui PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nui ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/J9ULM6_NECAM J9ULM6_NECAM] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Human hookworm]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Hofmann, A]] | + | [[Category: Necator americanus]] |
- | [[Category: Excretory/secretory product]] | + | [[Category: Hofmann A]] |
- | [[Category: Scp/tap]]
| + | |
- | [[Category: Unknown function]]
| + | |
| Structural highlights
Function
J9ULM6_NECAM
Publication Abstract from PubMed
Hookworm activation-associated secreted proteins can be structurally classified into at least three different groups. The hallmark feature of Group 1 activation-associated secreted proteins is a prominent equatorial groove, which is inferred to form a ligand binding site. Furthermore, a conserved tandem histidine motif is located in the centre of the groove and believed to provide or support a yet to be determined catalytic activity. Here, we report three-dimensional crystal structures of Na-ASP-2, an L3-secreted activation-associated secreted protein from the human hookworm Necator americanus, which demonstrate transition metal binding ability of the conserved tandem histidine motif. We further identified moderate phosphohydrolase activity of recombinant Na-ASP-2, which relates to the tandem histidine motif. By panning a random 12-mer peptide phage library, we identified a peptide with high similarity to the human calcium-activated potassium channel SK3, and confirm binding of the synthetic peptide to recombinant Na-ASP-2 by differential scanning fluorimetry. Potential binding modes of the peptide to Na-ASP-2 were studied by molecular dynamics simulations which clearly identify a preferred topology of the Na-ASP-2:SK3 peptide complex.
Probing the equatorial groove of the hookworm protein and vaccine candidate antigen, Na-ASP-2.,Mason L, Tribolet L, Simon A, von Gnielinski N, Nienaber L, Taylor P, Willis C, Jones MK, Sternberg PW, Gasser RB, Loukas A, Hofmann A Int J Biochem Cell Biol. 2014 May;50:146-55. doi: 10.1016/j.biocel.2014.03.003., Epub 2014 Mar 13. PMID:24631931[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Mason L, Tribolet L, Simon A, von Gnielinski N, Nienaber L, Taylor P, Willis C, Jones MK, Sternberg PW, Gasser RB, Loukas A, Hofmann A. Probing the equatorial groove of the hookworm protein and vaccine candidate antigen, Na-ASP-2. Int J Biochem Cell Biol. 2014 May;50:146-55. doi: 10.1016/j.biocel.2014.03.003., Epub 2014 Mar 13. PMID:24631931 doi:http://dx.doi.org/10.1016/j.biocel.2014.03.003
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