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| | <StructureSection load='4phz' size='340' side='right'caption='[[4phz]], [[Resolution|resolution]] 2.59Å' scene=''> | | <StructureSection load='4phz' size='340' side='right'caption='[[4phz]], [[Resolution|resolution]] 2.59Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4phz]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Methylocystis_sp._atcc_49242 Methylocystis sp. atcc 49242]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PHZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4phz]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylocystis_sp._ATCC_49242 Methylocystis sp. ATCC 49242]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PHZ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=PGT:(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL+STEARATE'>PGT</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=PGT:(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL+STEARATE'>PGT</scene></td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4phz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4phz OCA], [https://pdbe.org/4phz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4phz RCSB], [https://www.ebi.ac.uk/pdbsum/4phz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4phz ProSAT]</span></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4pi0|4pi0]], [[4pi2|4pi2]]</td></tr>
| + | |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methane_monooxygenase_(particulate) Methane monooxygenase (particulate)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.18.3 1.14.18.3] </span></td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4phz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4phz OCA], [http://pdbe.org/4phz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4phz RCSB], [http://www.ebi.ac.uk/pdbsum/4phz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4phz ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Methylocystis sp. atcc 49242]] | + | [[Category: Methylocystis sp. ATCC 49242]] |
| - | [[Category: Rosenzweig, A C]] | + | [[Category: Rosenzweig AC]] |
| - | [[Category: Sirajuddin, S]] | + | [[Category: Sirajuddin S]] |
| - | [[Category: Bacterial protein]]
| + | |
| - | [[Category: Binding site]]
| + | |
| - | [[Category: Copper]]
| + | |
| - | [[Category: Methylocystaceae]]
| + | |
| - | [[Category: Oxidoreductase]]
| + | |
| - | [[Category: Oxygenase]]
| + | |
| - | [[Category: Protein binding]]
| + | |
| - | [[Category: Zinc]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Particulate methane monooxygenase (pMMO) is a membrane-bound metalloenzyme that oxidizes methane to methanol in methanotrophic bacteria. Zinc is a known inhibitor of pMMO, but the details of zinc binding and the mechanism of inhibition are not understood. Metal binding and activity assays on membrane-bound pMMO from Methylococcus capsulatus (Bath) reveal that zinc inhibits pMMO at two sites that are distinct from the copper active site. The 2.6 A resolution crystal structure of Methylocystis species strain Rockwell pMMO reveals two previously undetected bound lipids, and metal soaking experiments identify likely locations for the two zinc inhibition sites. The first is the crystallographic zinc site in the pmoC subunit, and zinc binding here leads to ordering of 10 previously unobserved residues. A second zinc site is present on the cytoplasmic side of the pmoC subunit. Parallels between these results and zinc inhibition studies of several respiratory complexes suggest that zinc might inhibit proton transfer in pMMO.
Effects of Zinc on Particulate Methane Monooxygenase Activity and Structure.,Sirajuddin S, Barupala D, Helling S, Marcus K, Stemmler TL, Rosenzweig AC J Biol Chem. 2014 Jun 18. pii: jbc.M114.581363. PMID:24942740[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Sirajuddin S, Barupala D, Helling S, Marcus K, Stemmler TL, Rosenzweig AC. Effects of Zinc on Particulate Methane Monooxygenase Activity and Structure. J Biol Chem. 2014 Jun 18. pii: jbc.M114.581363. PMID:24942740 doi:http://dx.doi.org/10.1074/jbc.M114.581363
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