Catalase
From Proteopedia
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</StructureSection> | </StructureSection> | ||
| - | == 3D Structures of catalase == | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | *catalase | ||
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| - | **[[1qqw]], [[1dgb]], [[1dgf]], [[1f4j]] – hCAT - human<br /> | ||
| - | **[[4cat]] – CAT – ''Penicillium janthinellum''<br /> | ||
| - | **[[1iph]], [[1gge]], [[1ye9]], [[4bfl]], [[5bv2]], [[6by0]] – EcCAT Hpii – ''Escherichia coli''<br /> | ||
| - | **[[1u2j]], [[1u2k]] – EcCAT Hpi C terminal<br /> | ||
| - | **[[1cf9]], [[1qf7]], [[1gg9]], [[1ggh]], [[1ggj]], [[1ggk]], [[1p7y]], [[1p7z]], [[1p80]], [[1p81]], [[1qws]], [[3p9p]], [[3p9q]], [[3p9r]], [[3p9s]], [[3pq2]], [[3pq3]], [[3pq4]], [[3pq5]], [[3pq6]], [[3pq7]], [[3pq8]], [[3ttt]], [[3ttu]], [[3ttv]], [[3ttw]], [[3ttx]], [[4enp]], [[4enq]], [[4enr]], [[4ens]], [[4ent]], [[4enu]], [[4env]], [[4enw]] - EcCAT Hpii (mutant)<br /> | ||
| - | **[[4blc]], [[1tgu]], [[1th3]], [[3nwl]], [[5gkn]] – bCAT – Bovine<br /> | ||
| - | **[[3j7b]] – bCAT – MicroED<br /> | ||
| - | **[[6jnu]], [[6jnt]] – bCAT – Cryo EM<br /> | ||
| - | **[[1a4e]] – CAT A – yeast<br /> | ||
| - | **[[2cag]], [[1e93]], [[1m85]], [[1mqf]], [[1h7k]] – PmCAT – ''Proteus mirabilis''<br /> | ||
| - | **[[1h6n]], [[3hb6]] - PmCAT (mutant)<br /> | ||
| - | **[[1hbz]], [[1gwe]], [[1gwf]] – MlCAT – ''Micrococcus lysodeikticus''<br /> | ||
| - | **[[1m7s]] – CAT CatF – ''Pseudomonas syringae''<br /> | ||
| - | **[[1qwl]], [[2iqf]] – HpCAT – ''Helicobacter pylori''<br /> | ||
| - | **[[1si8]] – CAT – ''Enterococcus Faecalis''<br /> | ||
| - | **[[1ub2]] – CAT – ''Synechococcus elongatus''<br /> | ||
| - | **[[1sy7]] – NcCAT-1 – ''Neurospora crassa''<br /> | ||
| - | **[[5whq]], [[5whs]] – NcCAT-2<br /> | ||
| - | **[[3ej6]], [[3zj4]], [[3zj5]], [[4aj9]], [[4bim]] – NcCAT-3<br /> | ||
| - | **[[2j2m]] – CAT – ''Exiguobacterium oxidotolerans''<br /> | ||
| - | **[[2isa]] – CAT – ''Vibrio salmonicida''<br /> | ||
| - | **[[2xf2]] - 2iuf – PjCAT – ''Penicillium janthinellum''<br /> | ||
| - | **[[2xq1]] – CAT – ''Pichia angusta''<br /> | ||
| - | **[[4e37]] – CAT – ''Pseudomonas aeruginosa''<br /> | ||
| - | **[[3ut2]] – CAT – rice blast fungus<br /> | ||
| - | **[[4cab]] – CAT – ''Deinococcus radiodurans''<br /> | ||
| - | **[[4qol]] – BpCAT – ''Bacillus pumilus''<br /> | ||
| - | **[[5yem]], [[5y17]], [[5xzn]], [[5xzm]], [[5xy4]], [[5xvz]] – CAT (mutant) – ''Mycothermus thrmophilus''<br /> | ||
| - | |||
| - | *Catalase binary complexes | ||
| - | |||
| - | **[[7cat]], [[8cat]] – bCAT + NADPH <br /> | ||
| - | **[[2cah]] - PmCAT + NADPH<br /> | ||
| - | **[[1gwh]] - MlCAT + NADPH<br /> | ||
| - | **[[1nm0]] – PmCAT + formiate<br /> | ||
| - | **[[1qwm]] - HpCAT + formic acid<br /> | ||
| - | **[[1dgg]] – hCAT + CN<br /> | ||
| - | **[[1th2]] – bCAT + N3<br /> | ||
| - | **[[3rgp]], [[3re8]] – bCAT + NO<br /> | ||
| - | **[[3rgs]] – bCAT + NH3<br /> | ||
| - | **[[5sw6]], [[5sx0]] - BpCAT KatG + O<br /> | ||
| - | **[[2iuf]] – PjCAT + O<br /> | ||
| - | **[[1dgh]] – hCAT + amino-triazole<br /> | ||
| - | **[[1th4]] - bCAT + amino-triazole<br /> | ||
| - | **[[1ggf]] - EcCAT Hpii (mutant) + H2O2<br /> | ||
| - | **[[3vu3]] – EcCAT Hpii + HFQ<br /> | ||
| - | **[[4b7f]], [[4b7h]] – CgCAT + NADPH + NO – ''Corynebacterium glutamicum''<br /> | ||
| - | **[[4b7g]] – CgCAT + NADPH <br /> | ||
| - | **[[4qom]] – BpCAT + pyrogallol<br /> | ||
| - | **[[4qon]] – BpCAT + catechol<br /> | ||
| - | **[[4qoo]] – BpCAT + resorcinol<br /> | ||
| - | **[[4qop]] – BpCAT + hydroquinone<br /> | ||
| - | **[[4qoq]] – BpCAT + guaiacol<br /> | ||
| - | **[[4qom]], [[4qor]] – BpCAT + chlorophenol<br /> | ||
| - | |||
| - | *Pseudocatalase Mn-containing | ||
| - | |||
| - | **[[1jku]] – LpPCAT-Mn – ''Lactobacillus plantarum''<br /> | ||
| - | **[[1o9i]] – LpPCAT-Mn (mutant) <br /> | ||
| - | **[[2cwl]] – TtPCAT-Mn Mn-free – ''Thermus thermophilus''<br /> | ||
| - | **[[2v8u]] - TtPCAT-Mn<br /> | ||
| - | **[[2v8t]] - TtPCAT-Mn + chloride<br /> | ||
| - | **[[1jkv]] - LpPCAT-Mn + N3<br /> | ||
| - | |||
| - | *Catalase-phenol oxidase | ||
| - | |||
| - | **[[4aue]], [[4aul]], [[4aum]], [[4aun]], [[4b2y]], [[4b31]], [[4b40]], [[4b5k]], [[4b7a]] - CATPO - ''Scytalidium thermophilum'' <br /> | ||
| - | |||
| - | *Catalase-peroxidase | ||
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| - | **[[1sj2]], [[2cca]] – MtCAT KatG – ''Mycobacterium tuberculosis''<br /> | ||
| - | **[[2ccd]], [[4c50]], [[4c51]] - MtCAT KatG (mutant) <br /> | ||
| - | **[[1ub2]], [[3wnu]], [[3wxo]] – SeCAT KatG – ''Synechococcus elongatus''<br /> | ||
| - | **[[3x16]], [[4pae]] – SeCAT KatG (mutant)<br /> | ||
| - | **[[5l05]], [[5sw4]], [[5sw5]], [[5sx3]], [[5sx6]], [[5sx7]] – BpCAT KatG – ''Burkholderia pseudomallei''<br /> | ||
| - | **[[5l02]], [[5sx1]], [[5sx2]], [[5sxw]], [[5sxx]], [[5syh]], [[5syu]], [[5syv]], [[5syw]], [[5syx]], [[5syy]], [[6caw]], [[6cc6]], [[6cek]], [[5v4o]], [[5v53]], [[5txq]], [[5kq0]], [[5kq2]], [[5kq3]], [[5kq6]], [[5kqh]], [[5kqi]], [[5kqk]], [[5kqn]], [[5kqq]], [[5ksf]], [[5ksk]] - BpCAT KatG (mutant) <br /> | ||
| - | **[[1itk]], [[2a9e]], [[3uw8]] – HmCAT KatG – ''Haloarcula marismortui'' <br /> | ||
| - | **[[3vlh]], [[3vlk]], [[3vlm]] – HmCAT KatG (mutant) <br /> | ||
| - | **[[1u2l]] – EcCAT KatG<br /> | ||
| - | **[[5cjh]], [[5jhx]], [[5jhy]], [[5jhz]] – CAT KatG 2 – ''Magnaporthe oryzae''<br /> | ||
| - | |||
| - | *Catalase-peroxidase complex | ||
| - | |||
| - | **[[5sxr]] - BpCAT KatG + NAD<br /> | ||
| - | **[[3vli]], [[3vlj]] - HmCAT KatG (mutant) + CN<br /> | ||
| - | **[[3vll]] - HmCAT KatG (mutant) + salicylhydroxamic acid<br /> | ||
| - | **[[5sw6]], [[5sx0]], [[6mq1]] - BpCAT KatG + O<br /> | ||
| - | **[[5kt9]] - BpCAT KatG (mutant) + O2<br /> | ||
| - | **[[6b9b]] - BpCAT KatG + maltose<br /> | ||
| - | **[[5sxq]]- BpCAT KatG + isonicotinic acid<br /> | ||
| - | **[[6mpy]], [[6mq0]] - BpCAT KatG + hydrazine derivative<br /> | ||
| - | **[[5sxs]] - BpCAT KatG + isonicotinic acid + hydrazine + AMP<br /> | ||
| - | **[[5sxt]] - BpCAT KatG + isonicotinic acid + hydrazine<br /> | ||
| - | **[[6cdq]], [[6cfq]], [[5ksn]], [[5ksg]], [[5kt8]], [[3n3h]], [[5syi]] - BpCAT KatG (mutant) + isonicotinic acid + hydrazine<br /> | ||
| - | **[[5syj]] - BpCAT KatG (mutant) + isoniazid<br /> | ||
| - | **[[5syk]] - BpCAT KatG + H2O2<br /> | ||
| - | **[[5syl]] - BpCAT KatG + KCN<br /> | ||
| - | |||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 07:50, 29 April 2019
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References
- ↑ Purwar N, McGarry JM, Kostera J, Pacheco AA, Schmidt M. Interaction of Nitric Oxide with Catalase: Structural and Kinetic Analysis. Biochemistry. 2011 May 6. PMID:21524057 doi:10.1021/bi200130r
- ↑ Bertrand T, Eady NA, Jones JN, Jesmin, Nagy JM, Jamart-Gregoire B, Raven EL, Brown KA. Crystal structure of Mycobacterium tuberculosis catalase-peroxidase. J Biol Chem. 2004 Sep 10;279(37):38991-9. Epub 2004 Jul 1. PMID:15231843 doi:10.1074/jbc.M402382200
- ↑ Koclar Avci G, Coruh N, Bolukbasi U, Ogel ZB. Oxidation of phenolic compounds by the bifunctional catalase-phenol oxidase (CATPO) from Scytalidium thermophilum. Appl Microbiol Biotechnol. 2013 Jan;97(2):661-72. doi: 10.1007/s00253-012-3950-2., Epub 2012 Feb 28. PMID:22370948 doi:http://dx.doi.org/10.1007/s00253-012-3950-2
- ↑ Melik-Adamyan W, Bravo J, Carpena X, Switala J, Mate MJ, Fita I, Loewen PC. Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli. Proteins. 2001 Aug 15;44(3):270-81. PMID:11455600
- ↑ Melik-Adamyan W, Bravo J, Carpena X, Switala J, Mate MJ, Fita I, Loewen PC. Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli. Proteins. 2001 Aug 15;44(3):270-81. PMID:11455600
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