6myd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:41, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6myd' size='340' side='right'caption='[[6myd]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='6myd' size='340' side='right'caption='[[6myd]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6myd]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MYD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MYD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6myd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MYD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.399&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/RING-type_E3_ubiquitin_transferase RING-type E3 ubiquitin transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.27 2.3.2.27] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6myd OCA], [http://pdbe.org/6myd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6myd RCSB], [http://www.ebi.ac.uk/pdbsum/6myd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6myd ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6myd OCA], [https://pdbe.org/6myd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6myd RCSB], [https://www.ebi.ac.uk/pdbsum/6myd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6myd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TRAF6_DANRE TRAF6_DANRE]] E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction.
+
[https://www.uniprot.org/uniprot/TRAF6_DANRE TRAF6_DANRE] E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 6myd" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6myd" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[TNF receptor-associated factor 3D structures|TNF receptor-associated factor 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Danio rerio]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: RING-type E3 ubiquitin transferase]]
+
[[Category: Kagan JC]]
-
[[Category: Kagan, J C]]
+
[[Category: King DS]]
-
[[Category: King, D S]]
+
[[Category: Kranzusch PJ]]
-
[[Category: Kranzusch, P J]]
+
[[Category: Lee ASY]]
-
[[Category: Lee, A S.Y]]
+
[[Category: Orzalli MH]]
-
[[Category: Mann, C C.de Oliveira]]
+
[[Category: De Oliveira Mann CC]]
-
[[Category: Orzalli, M H]]
+
-
[[Category: Immune system]]
+
-
[[Category: Innate immunity]]
+
-
[[Category: Nf-kappab]]
+
-
[[Category: Sting]]
+
-
[[Category: Tmem173]]
+
-
[[Category: Traf6]]
+

Current revision

Structure of zebrafish TRAF6 in complex with STING CTT

PDB ID 6myd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools