This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rkf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4rkf' size='340' side='right'caption='[[4rkf]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='4rkf' size='340' side='right'caption='[[4rkf]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rkf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RKF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rkf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RKF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1zbd|1zbd]], [[3rab|3rab]], [[4rke|4rke]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rkf OCA], [https://pdbe.org/4rkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rkf RCSB], [https://www.ebi.ac.uk/pdbsum/4rkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rkf ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rab3, CG7576 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rkf OCA], [http://pdbe.org/4rkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rkf RCSB], [http://www.ebi.ac.uk/pdbsum/4rkf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rkf ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RAB3_DROME RAB3_DROME]] Involved in exocytosis by regulating a late step in synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal (By similarity).
+
[https://www.uniprot.org/uniprot/RAB3_DROME RAB3_DROME] Involved in exocytosis by regulating a late step in synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 18:
</div>
</div>
<div class="pdbe-citations 4rkf" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4rkf" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Drome]]
+
[[Category: Drosophila melanogaster]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Depner, H]]
+
[[Category: Depner H]]
-
[[Category: Driller, J H]]
+
[[Category: Driller JH]]
-
[[Category: Lardong, J A]]
+
[[Category: Lardong JA]]
-
[[Category: Loll, B]]
+
[[Category: Loll B]]
-
[[Category: Petzoldt, A]]
+
[[Category: Petzoldt A]]
-
[[Category: Sigrist, S J]]
+
[[Category: Sigrist SJ]]
-
[[Category: Wahl, M C]]
+
[[Category: Wahl MC]]
-
[[Category: Weise, C]]
+
[[Category: Weise C]]
-
[[Category: Gtp hydrolysis]]
+
-
[[Category: Hydrolase]]
+

Revision as of 07:00, 2 March 2023

Drosophila melanogaster Rab3 bound to GMPPNP

PDB ID 4rkf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools