|
|
| Line 3: |
Line 3: |
| | <StructureSection load='4r6f' size='340' side='right'caption='[[4r6f]], [[Resolution|resolution]] 1.73Å' scene=''> | | <StructureSection load='4r6f' size='340' side='right'caption='[[4r6f]], [[Resolution|resolution]] 1.73Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4r6f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R6F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R6F FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4r6f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R6F FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4r58|4r58]], [[4r5c|4r5c]], [[4r5d|4r5d]], [[4r6g|4r6g]], [[4r6j|4r6j]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r6f OCA], [https://pdbe.org/4r6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r6f RCSB], [https://www.ebi.ac.uk/pdbsum/4r6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r6f ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r6f OCA], [http://pdbe.org/4r6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r6f RCSB], [http://www.ebi.ac.uk/pdbsum/4r6f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r6f ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| Line 21: |
Line 20: |
| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Synthetic construct sequences]] | + | [[Category: Synthetic construct]] |
| - | [[Category: Shen, B W]] | + | [[Category: Shen BW]] |
| - | [[Category: Stoddard, B L]] | + | [[Category: Stoddard BL]] |
| - | [[Category: De novo protein]]
| + | |
| - | [[Category: Leucine rich motif]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Shape complementarity is an important component of molecular recognition, and the ability to precisely adjust the shape of a binding scaffold to match a target of interest would greatly facilitate the creation of high-affinity protein reagents and therapeutics. Here we describe a general approach to control the shape of the binding surface on repeat-protein scaffolds and apply it to leucine-rich-repeat proteins. First, self-compatible building-block modules are designed that, when polymerized, generate surfaces with unique but constant curvatures. Second, a set of junction modules that connect the different building blocks are designed. Finally, new proteins with custom-designed shapes are generated by appropriately combining building-block and junction modules. Crystal structures of the designs illustrate the power of the approach in controlling repeat-protein curvature.
Control of repeat-protein curvature by computational protein design.,Park K, Shen BW, Parmeggiani F, Huang PS, Stoddard BL, Baker D Nat Struct Mol Biol. 2015 Jan 12. doi: 10.1038/nsmb.2938. PMID:25580576[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Park K, Shen BW, Parmeggiani F, Huang PS, Stoddard BL, Baker D. Control of repeat-protein curvature by computational protein design. Nat Struct Mol Biol. 2015 Jan 12. doi: 10.1038/nsmb.2938. PMID:25580576 doi:http://dx.doi.org/10.1038/nsmb.2938
|
