Chemotaxis protein
From Proteopedia
(Difference between revisions)
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of chemotaxis protein == | ||
| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | |||
| - | *CheY | ||
| - | |||
| - | **[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]], [[6chy]], [[5chy]] – EcCheY (mutant) – ''Escherichia coli''<BR /> | ||
| - | **[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br /> | ||
| - | **[[4qyw]] - TmCheY (mutant) <br /> | ||
| - | **[[4h60]], [[4hnr]], [[4jp1]] – VcCheY – ''Vibrio cholerae''<br /> | ||
| - | **[[4hnq]] - VcCheY (mutant) <br /> | ||
| - | **[[3gwg]] – HpCheY - ''Helicobacter pylori''<BR /> | ||
| - | **[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR /> | ||
| - | **[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR /> | ||
| - | **[[1djm]] – EcCheY – NMR<BR /> | ||
| - | **[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | ||
| - | **[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> | ||
| - | |||
| - | *''CheY complexes'' | ||
| - | |||
| - | **[[1zdm]] – EcCheY + Xe<BR /> | ||
| - | **[[3h1e]] - HpCheY + BeF3 + Mn<BR /> | ||
| - | **[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR /> | ||
| - | **[[4hns]] - VcCheY + BeF3 + Mg<br /> | ||
| - | **[[4lx8]] - VcCheY + Mg<br /> | ||
| - | **[[6ekg]] – CheY + Mg – ''Methaococcus maripaludis''<br /> | ||
| - | **[[1fqw]] - EcCheY + BeF3 + Mn<br /> | ||
| - | **[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br /> | ||
| - | **[[5d2c]], [[5dgc]], [[5dkf]] - EcCheY (mutant) + BeF3 + Mn + imidazole<br /> | ||
| - | **[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR /> | ||
| - | **[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR /> | ||
| - | **[[2b1j]], [[1f4v]] - EcCheY + flagellar motor switch protein FLIM N terminal<br /> | ||
| - | **[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR /> | ||
| - | **[[1u0s]] - TmCheY response regulating domain + CheA P2 domain <BR /> | ||
| - | **[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR /> | ||
| - | **[[1kmi]] - EcCheY + CheZ<BR /> | ||
| - | **[[2lp4]] - EcCheY + CheA<br /> | ||
| - | **[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ peptide <BR /> | ||
| - | **[[2che]], [[2chf]] – StCheY + Mg<br /> | ||
| - | **[[4iga]] - TmCheY + flagellar motor switch protein FLIM peptide<br /> | ||
| - | |||
| - | *Chey-like | ||
| - | |||
| - | **[[3snk]] - CheyL - ''Mesorhizobium loti''<br /> | ||
| - | **[[3cg4]], [[3crn]] - CheyL reciever domain - ''Methanospirillum hungatei''<br /> | ||
| - | **[[3i42]] - CheyL receiver domain - ''Methylobacter flagellates''<br /> | ||
| - | **[[3bre]] - CheyL - ''Pseudomonas aeruginosa''<br /> | ||
| - | |||
| - | *CheX | ||
| - | |||
| - | **[[1xko]]– TmCheX<BR /> | ||
| - | **[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR /> | ||
| - | **[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br /> | ||
| - | |||
| - | *CheC | ||
| - | |||
| - | **[[1xkr]] – TmCheC<BR /> | ||
| - | **[[2f9z]] – TmCheC + CheD<BR /> | ||
| - | **[[3qta]] – CheC – ''Haloarcula marismortui''<BR /> | ||
| - | |||
| - | *CheR or chemotaxis protein methyltransferase | ||
| - | |||
| - | **[[1bc5]] – StCheR + chemotaxis receptor peptide <BR /> | ||
| - | **[[1af7]] – StCheR<br /> | ||
| - | **[[5ftw]] – CheR + SAH – ''Bacillus subtilis''<br /> | ||
| - | |||
| - | *CheA | ||
| - | |||
| - | **[[1fwp]] – EcCheA – NMR<br /> | ||
| - | **[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR /> | ||
| - | **[[1i5n]] – StCheA P1 domain<br /> | ||
| - | **[[1i58]], [[1i59]], [[1i5a]], [[1i5b]], [[1i5d]] - TmCheA P4 domain + ATP analog<br /> | ||
| - | **[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br /> | ||
| - | **[[1tqg]] – TmCheA phosphotransferase domain<br /> | ||
| - | **[[2ld6]] – TmCheA HPT domain - NMR<BR /> | ||
| - | **[[2ch4]] - TmCheA kinase and regulatory domains + CheW<br /> | ||
| - | **[[4xiv]] - TmCheA kinase and dimerization domains<br /> | ||
| - | **[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br /> | ||
| - | |||
| - | *CheB | ||
| - | |||
| - | **[[1a2o]], [[1chd]]– StCheB<br /> | ||
| - | **[[3sft]] – TmCheB catalytic domain <br /> | ||
| - | **[[3t8y]] – TmCheB response regulator domain<br /> | ||
| - | |||
| - | *CheW | ||
| - | |||
| - | **[[1k0s]] – TmCheW<br /> | ||
| - | **[[2ho9]] – EcCheW - NMR<BR /> | ||
| - | |||
| - | *Aspartate chemotaxis receptor | ||
| - | |||
| - | **[[1jmw]], [[1vls]] – StChe LBD<br /> | ||
| - | **[[1lih]] – StChe LBD (mutant)<br /> | ||
| - | **[[1was]] – StChe LBD<br /> | ||
| - | **[[1wat]], [[1vlt]], [[2lig]] – StChe LBD + aspartate<br /> | ||
| - | **[[2asr]] – EcChe <br /> | ||
| - | |||
| - | *Methyl-accepting chemotaxis protein | ||
| - | |||
| - | **[[2m7u]], [[2m7v]] – TeMche – ''Thermosynechococcus elongatus''<br /> | ||
| - | **[[3vv4]] – TeMche GAF domain<br /> | ||
| - | **[[4fof]], [[4glq]] – TeMche GAF domain (mutant)<br /> | ||
| - | **[[3w2z]] – Mche residues 221-397 – Nostoc<br /> | ||
| - | **[[3g67]] – TmMche<BR /> | ||
| - | **[[3g6b]] – TmMche (mutant) <BR /> | ||
| - | **[[2ch7]] – TmMche cytoplasmic domain<BR /> | ||
| - | **[[1qu7]] – EcMcheI cytoplasmic domain<BR /> | ||
| - | **[[2ld6]] – EcMche peptide - NMR<BR /> | ||
| - | **[[4z9j]] - EcMcheII LBD <br /> | ||
| - | **[[2d4u]] – EcMcheI LBD (mutant)<br /> | ||
| - | **[[3zx6]] – EcMcheI/HAMP<br /> | ||
| - | **[[1jmw]] - StMche LBD (mutant) <BR /> | ||
| - | **[[2qhk]], [[4exo]] – Mche N-terminal – ''Vibrio parahaemolyticus''<BR /> | ||
| - | **[[3c8c]] – Mche N-terminal <BR /> | ||
| - | **[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR /> | ||
| - | |||
| - | *Methyl-accepting chemotaxis protein complex | ||
| - | |||
| - | **[[3atp]] - EcMcheI LBD + serine<BR /> | ||
| - | **[[4z9h]], [[4z9i]] - EcMcheII LBD + aspartic acid<br /> | ||
| - | **[[5ave]] - VcMche LBD + serine<br /> | ||
| - | **[[5avf]] - VcMche LBD + taurine<br /> | ||
| - | **[[5t7m]], [[5t65]], [[5ltx]], [[5lto]], [[5lt9]] - PaMche LBD + amino acid – ''Pseudomonas aeruginosa''<br /> | ||
| - | **[[5ltv]] - PaMche LBD + GABA<br /> | ||
| - | **[[6f9g]] - Mche LBD + putrescine – ''Pseudomonas putida''<br /> | ||
| - | |||
| - | *''Heme-containing methyl-accepting chemotaxis protein'' | ||
| - | |||
| - | **[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]], [[4fdk]] – TtMche H-Nox domain (mutant)<br /> | ||
| - | **[[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<br /> | ||
| - | **[[1u4h]], [[1u55]], [[1u56]], [[3tf0]], [[3tf1]] - TtMche H-Nox domain<br /> | ||
| - | **[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<br /> | ||
| - | **[[3nvr]], [[3nvu]] – TtMche N terminal (mutant)<br /> | ||
| - | **[[4it2]] - CsMche H-Nox domain Mn-porphyrin – ''Caldanaerobacter subterraneus''<br /> | ||
| - | **[[5jru]] - CsMche H-Nox domain Fe-porphyrin <br /> | ||
| - | **[[5jrv]] - CsMche H-Nox domain Fe-porphyrin + NO<br /> | ||
| - | **[[5jrx]] - CsMche H-Nox domain Fe-porphyrin (mutant) + CO<br /> | ||
| - | |||
| - | *Flagellar motor protein FLIN | ||
| - | |||
| - | **[[1yab]] – TmFLIN<BR /> | ||
| - | |||
| - | *Chemotaxis protein MotB | ||
| - | |||
| - | **[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br /> | ||
| - | **[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR /> | ||
| - | **[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br /> | ||
| - | |||
| - | *Chemotaxis protein CKI | ||
| - | **[[3mm4]] – AtCKI receiver domain – ''Arabidopsis thaliana''<br /> | ||
| - | **[[3mmn]] – AtCKI receiver domain + Mg<br /> | ||
| - | |||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:12, 7 May 2019
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References
- ↑ Adler J, Tso WW. "Decision"-making in bacteria: chemotactic response of Escherichia coli to conflicting stimuli. Science. 1974 Jun 21;184(4143):1292-4. PMID:4598187
- ↑ Djordjevic S, Stock AM. Chemotaxis receptor recognition by protein methyltransferase CheR. Nat Struct Biol. 1998 Jun;5(6):446-50. PMID:9628482
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