Inorganic pyrophosphatase
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
The biological assembly of Inorganic pyrophosphatase ''Helicobacter pylori'' is <scene name='48/488499/Cv/6'>homohexamer</scene>. PPase <scene name='48/488499/Cv/7'>binding pocket has electrostatic potential and is composed of 3 lysine residues, a tyrosine and several water molecules</scene><ref>PMID:16988955</ref>. {{Template:ColorKey_Charge_Anionic}} / {{Template:ColorKey_Charge_Cationic}}. Water molecules shown as red spheres. | The biological assembly of Inorganic pyrophosphatase ''Helicobacter pylori'' is <scene name='48/488499/Cv/6'>homohexamer</scene>. PPase <scene name='48/488499/Cv/7'>binding pocket has electrostatic potential and is composed of 3 lysine residues, a tyrosine and several water molecules</scene><ref>PMID:16988955</ref>. {{Template:ColorKey_Charge_Anionic}} / {{Template:ColorKey_Charge_Cationic}}. Water molecules shown as red spheres. | ||
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| + | ==3D structures of inorganic pyrophosphatase== | ||
| + | [[Inorganic pyrophosphatase 3D structures]] | ||
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</StructureSection> | </StructureSection> | ||
==3D structures of inorganic pyrophosphatase== | ==3D structures of inorganic pyrophosphatase== | ||
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*Pyrophosphatase | *Pyrophosphatase | ||
| + | **[[6c45]] – PPase – human<br /> | ||
**[[1pyp]] – yPPase – yeast<br /> | **[[1pyp]] – yPPase – yeast<br /> | ||
**[[1igp]], [[1faj]], [[2eip]], [[1jfd]], [[4um4]] – EcPPase – ''Escherichia coli''<br /> | **[[1igp]], [[1faj]], [[2eip]], [[1jfd]], [[4um4]] – EcPPase – ''Escherichia coli''<br /> | ||
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**[[3q3l]] – TtPPase – neutron diffraction<br /> | **[[3q3l]] – TtPPase – neutron diffraction<br /> | ||
**[[4lug]], [[5ls0]] - PPase – ''Arabidopsis thaliana''<br /> | **[[4lug]], [[5ls0]] - PPase – ''Arabidopsis thaliana''<br /> | ||
| + | **[[6mt1]], [[6mt2]] – PPase – ''Medicago truncatula''<br /> | ||
*Pyrophosphatase binary complex | *Pyrophosphatase binary complex | ||
| - | **[[1ino]] – EcPPase + Mn<br /> | ||
| - | **[[1ipw]], [[1obw]] - EcPPase + Mg<br /> | ||
| - | **[[1i40]] - EcPPase + Ca<br /> | ||
**[[1wgi]] - yPPase + Mn<br /> | **[[1wgi]] - yPPase + Mn<br /> | ||
**[[1huk]] - yPPase + Mg<br /> | **[[1huk]] - yPPase + Mg<br /> | ||
**[[1huj]], [[2ik1]] - yPPase (mutant) + Mg<br /> | **[[1huj]], [[2ik1]] - yPPase (mutant) + Mg<br /> | ||
| + | **[[1ino]] – EcPPase + Mn<br /> | ||
| + | **[[1ipw]], [[1obw]] - EcPPase + Mg<br /> | ||
| + | **[[1i40]] - EcPPase + Ca<br /> | ||
**[[1qez]] - PPase + Mg – ''Sulfolobus acidocaldarius''<br /> | **[[1qez]] - PPase + Mg – ''Sulfolobus acidocaldarius''<br /> | ||
**[[3r5u]] – TtPPase + Mn <br /> | **[[3r5u]] – TtPPase + Mn <br /> | ||
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**[[5tea]] – PPase + Ca – ''Neisseria gonorrhieae''<br /> | **[[5tea]] – PPase + Ca – ''Neisseria gonorrhieae''<br /> | ||
**[[5h4f]] - PPase + Zn – synthetic<br /> | **[[5h4f]] - PPase + Zn – synthetic<br /> | ||
| + | **[[6n1c]] - PPase + Ala – ''Legionella pneumophila''<br /> | ||
*Pyrophosphatase ternary complex | *Pyrophosphatase ternary complex | ||
Revision as of 08:15, 28 August 2019
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3D structures of inorganic pyrophosphatase
Updated on 28-August-2019
References
- ↑ Harold FM. Inorganic polyphosphates in biology: structure, metabolism, and function. Bacteriol Rev. 1966 Dec;30(4):772-94. PMID:5342521
- ↑ Chao TC, Huang H, Tsai JY, Huang CY, Sun YJ. Kinetic and structural properties of inorganic pyrophosphatase from the pathogenic bacterium Helicobacter pylori. Proteins. 2006 Nov 15;65(3):670-80. PMID:16988955 doi:10.1002/prot.21093
