6hkv

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Current revision (05:37, 23 April 2025) (edit) (undo)
 
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<StructureSection load='6hkv' size='340' side='right'caption='[[6hkv]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='6hkv' size='340' side='right'caption='[[6hkv]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6hkv]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Tspyv Tspyv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HKV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HKV FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6hkv]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichodysplasia_spinulosa-associated_polyomavirus Trichodysplasia spinulosa-associated polyomavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HKV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GXB:Sialylated+precision+glycomacromolecule'>GXB</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=862909 TSPyV])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GXB:(2~{S},4~{R},5~{R},6~{R})-5-acetamido-2-[[1-[[4-[2-[[4-[2-[2-[2-[[4-[2-[2-[2-[[4-[2-[2-[2-[[4-[2-[[4-[[4-[[(2~{R},4~{S},5~{R},6~{R})-5-acetamido-2-carboxy-4-oxidanyl-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]methyl]phenyl]carbonyl-[2-[(4-azanyl-4-oxidanylidene-butanoyl)amino]ethyl]amino]ethylamino]-4-oxidanylidene-butanoyl]amino]ethoxy]ethoxy]ethylamino]-4-oxidanylidene-butanoyl]amino]ethoxy]ethoxy]ethylamino]-4-oxidanylidene-butanoyl]amino]ethoxy]ethoxy]ethylamino]-4-oxidanylidene-butanoyl]amino]ethyl-(2-acetamidoethyl)carbamoyl]phenyl]methyl]-1,2,3-triazol-4-yl]methoxy]-4-oxidanyl-6-[(1~{S},2~{S})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic+acid'>GXB</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hkv OCA], [http://pdbe.org/6hkv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hkv RCSB], [http://www.ebi.ac.uk/pdbsum/6hkv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hkv ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hkv OCA], [https://pdbe.org/6hkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hkv RCSB], [https://www.ebi.ac.uk/pdbsum/6hkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hkv ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/E2ESL7_9POLY E2ESL7_9POLY]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6hkv" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6hkv" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Tspyv]]
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[[Category: Trichodysplasia spinulosa-associated polyomavirus]]
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[[Category: Rustmeier, N H]]
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[[Category: Rustmeier NH]]
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[[Category: Stehle, T]]
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[[Category: Stehle T]]
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[[Category: Sialic acid derivative]]
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[[Category: Viral protein]]
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Current revision

Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with sialylated precision glycooligomers

PDB ID 6hkv

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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