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| | <StructureSection load='4w5w' size='340' side='right'caption='[[4w5w]], [[Resolution|resolution]] 2.90Å' scene=''> | | <StructureSection load='4w5w' size='340' side='right'caption='[[4w5w]], [[Resolution|resolution]] 2.90Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4w5w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4W5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4W5W FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4w5w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4W5W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4W5W FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RCA, At2g39730, T5I7.3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4w5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4w5w OCA], [https://pdbe.org/4w5w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4w5w RCSB], [https://www.ebi.ac.uk/pdbsum/4w5w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4w5w ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4w5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4w5w OCA], [http://pdbe.org/4w5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4w5w RCSB], [http://www.ebi.ac.uk/pdbsum/4w5w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4w5w ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/RCA_ARATH RCA_ARATH]] Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure. | + | [https://www.uniprot.org/uniprot/RCA_ARATH RCA_ARATH] Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure. |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Arath]] | + | [[Category: Arabidopsis thaliana]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Andersson, I]] | + | [[Category: Andersson I]] |
| - | [[Category: Hasse, D]] | + | [[Category: Hasse D]] |
| - | [[Category: Larsson, A M]] | + | [[Category: Larsson AM]] |
| - | [[Category: Chaperone]]
| + | |
| - | [[Category: Photosynthetic carbon fixation]]
| + | |
| - | [[Category: Rubisco activase]]
| + | |
| Structural highlights
Function
RCA_ARATH Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure.
Publication Abstract from PubMed
The CO2-fixing enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) is inactivated by the formation of dead-end complexes with inhibitory sugar phosphates. In plants and green algae, the ATP-dependent motor protein Rubisco activase restores catalytic competence by facilitating conformational changes in Rubisco that promote the release of the inhibitory compounds from the active site. Here, the crystal structure of Rubisco activase from Arabidopsis thaliana is presented at 2.9 A resolution. The structure reveals an AAA+ two-domain structure. More than 100 residues in the protein were not visible in the electron-density map owing to conformational disorder, but were verified to be present in the crystal by mass spectrometry. Two sulfate ions were found in the structure. One was bound in the loop formed by the Walker A motif at the interface of the domains. A second sulfate ion was bound at the N-terminal end of the first helix of the C-terminal domain. The protein packs in a helical fashion in the crystal, as observed previously for Rubisco activase, but differences in the helical pitch indicate flexibility in the packing of the protein.
Structure of Arabidopsis thaliana Rubisco activase.,Hasse D, Larsson AM, Andersson I Acta Crystallogr D Biol Crystallogr. 2015 Apr;71(Pt 4):800-8. doi:, 10.1107/S1399004715001182. Epub 2015 Mar 26. PMID:25849391[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hasse D, Larsson AM, Andersson I. Structure of Arabidopsis thaliana Rubisco activase. Acta Crystallogr D Biol Crystallogr. 2015 Apr;71(Pt 4):800-8. doi:, 10.1107/S1399004715001182. Epub 2015 Mar 26. PMID:25849391 doi:http://dx.doi.org/10.1107/S1399004715001182
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