This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6jet
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Actinonin bound crystal structure of class I type a peptide deformylase from Acinetobacter baumannii== | |
| - | + | <StructureSection load='6jet' size='340' side='right'caption='[[6jet]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6jet]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JET OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JET FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BB2:ACTINONIN'>BB2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | [[Category: | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jet FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jet OCA], [http://pdbe.org/6jet PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jet RCSB], [http://www.ebi.ac.uk/pdbsum/6jet PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jet ProSAT]</span></td></tr> |
| - | [[Category: Ho, T | + | </table> |
| - | [[Category: Kang, L | + | == Function == |
| + | [[http://www.uniprot.org/uniprot/A0A0J1A8B1_ACIBA A0A0J1A8B1_ACIBA]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Peptide deformylase]] | ||
| + | [[Category: Ho, T H]] | ||
| + | [[Category: Kang, L W]] | ||
| + | [[Category: Lee, I H]] | ||
| + | [[Category: Hydrolase]] | ||
Revision as of 04:08, 13 February 2020
Actinonin bound crystal structure of class I type a peptide deformylase from Acinetobacter baumannii
| |||||||||||
