6e66

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Current revision (05:10, 21 November 2024) (edit) (undo)
 
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<StructureSection load='6e66' size='340' side='right'caption='[[6e66]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='6e66' size='340' side='right'caption='[[6e66]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6e66]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E66 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6E66 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6e66]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6E66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6E66 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6e66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e66 OCA], [http://pdbe.org/6e66 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6e66 RCSB], [http://www.ebi.ac.uk/pdbsum/6e66 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6e66 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6e66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6e66 OCA], [https://pdbe.org/6e66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6e66 RCSB], [https://www.ebi.ac.uk/pdbsum/6e66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6e66 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NLEB1_ECO27 NLEB1_ECO27] Protein-arginine N-acetylglucosaminyltransferase effector that disrupts TNF signaling in infected cells, including NF-kappa-B signaling, apoptosis and necroptosis (PubMed:20126447, PubMed:20485572, PubMed:22144899, PubMed:23955153, PubMed:24025841, PubMed:28138023, PubMed:28522607, PubMed:30979585). Acts by catalyzing the transfer of a single N-acetylglucosamine (GlcNAc) to a conserved arginine residue in the death domain of host proteins FADD, TRADD, FAS, TNFRSF1A/TNFR1, TNFRSF25/DR3 and RIPK1: arginine GlcNAcylation prevents homotypic/heterotypic death domain interactions and assembly of the oligomeric TNF-alpha receptor complex, thereby disrupting TNF signaling (PubMed:23955153, PubMed:24025841, PubMed:26883593, PubMed:28522607, PubMed:28860194, PubMed:30979585). Has preference for host FADD as substrate compared to other death domain-containing proteins (PubMed:28860194). Also acts on host proteins without a death domain: catalyzes arginine GlcNAcylation of HIF1A, thereby regulating host glucose metabolism (PubMed:30125331). Also displays intra-bacterial activity by mediating GlcNAcylation of glutathione synthetase GshB (PubMed:31974499). Catalyzes auto-GlcNAcylation, which is required for activity toward death domain-containing host target proteins (PubMed:32432056). Shows a higher enzymatic activity than NleB2 (PubMed:23955153).<ref>PMID:20126447</ref> <ref>PMID:20485572</ref> <ref>PMID:22144899</ref> <ref>PMID:23955153</ref> <ref>PMID:24025841</ref> <ref>PMID:26883593</ref> <ref>PMID:28138023</ref> <ref>PMID:28522607</ref> <ref>PMID:28860194</ref> <ref>PMID:30125331</ref> <ref>PMID:30979585</ref> <ref>PMID:31974499</ref> <ref>PMID:32432056</ref>
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Shao, F]]
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[[Category: Shao F]]
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[[Category: Yao, Q]]
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[[Category: Yao Q]]
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[[Category: Zheng, Y Q]]
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[[Category: Zheng YQ]]
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[[Category: Arginine glcnacylation]]
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[[Category: Bacterial effector]]
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[[Category: Nleb]]
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[[Category: Transferase]]
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Current revision

Crystal structure of bacterial N-acetylglucosamine transferase NleB

PDB ID 6e66

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