4y76

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<StructureSection load='4y76' size='340' side='right'caption='[[4y76]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='4y76' size='340' side='right'caption='[[4y76]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4y76]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y76 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y76 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4y76]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y76 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y76 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4O1:N~2~-[(6-CHLORONAPHTHALEN-2-YL)SULFONYL]-N~2~-{(3S)-1-[(2S)-1-(4-METHYL-1,4-DIAZEPAN-1-YL)-1-OXOPROPAN-2-YL]-2-OXOPYRROLIDIN-3-YL}GLYCINAMIDE'>4O1</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4O1:N~2~-[(6-CHLORONAPHTHALEN-2-YL)SULFONYL]-N~2~-{(3S)-1-[(2S)-1-(4-METHYL-1,4-DIAZEPAN-1-YL)-1-OXOPROPAN-2-YL]-2-OXOPYRROLIDIN-3-YL}GLYCINAMIDE'>4O1</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_Xa Coagulation factor Xa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.6 3.4.21.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y76 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y76 OCA], [https://pdbe.org/4y76 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y76 RCSB], [https://www.ebi.ac.uk/pdbsum/4y76 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y76 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y76 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y76 OCA], [http://pdbe.org/4y76 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y76 RCSB], [http://www.ebi.ac.uk/pdbsum/4y76 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y76 ProSAT]</span></td></tr>
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</table>
</table>
== Disease ==
== Disease ==
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[[http://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN]] Defects in F10 are the cause of factor X deficiency (FA10D) [MIM:[http://omim.org/entry/227600 227600]]. A hemorrhagic disease with variable presentation. Affected individuals can manifest prolonged nasal and mucosal hemorrhage, menorrhagia, hematuria, and occasionally hemarthrosis. Some patients do not have clinical bleeding diathesis.<ref>PMID:2790181</ref> <ref>PMID:1973167</ref> <ref>PMID:1985698</ref> <ref>PMID:7669671</ref> <ref>PMID:8529633</ref> <ref>PMID:7860069</ref> <ref>PMID:8845463</ref> <ref>PMID:8910490</ref> <ref>PMID:10468877</ref> <ref>PMID:10746568</ref> <ref>PMID:10739379</ref> <ref>PMID:11248282</ref> <ref>PMID:11728527</ref> <ref>PMID:12945883</ref> <ref>PMID:15650540</ref> <ref>PMID:17393015</ref> <ref>PMID:19135706</ref>
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[https://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN] Defects in F10 are the cause of factor X deficiency (FA10D) [MIM:[https://omim.org/entry/227600 227600]. A hemorrhagic disease with variable presentation. Affected individuals can manifest prolonged nasal and mucosal hemorrhage, menorrhagia, hematuria, and occasionally hemarthrosis. Some patients do not have clinical bleeding diathesis.<ref>PMID:2790181</ref> <ref>PMID:1973167</ref> <ref>PMID:1985698</ref> <ref>PMID:7669671</ref> <ref>PMID:8529633</ref> <ref>PMID:7860069</ref> <ref>PMID:8845463</ref> <ref>PMID:8910490</ref> <ref>PMID:10468877</ref> <ref>PMID:10746568</ref> <ref>PMID:10739379</ref> <ref>PMID:11248282</ref> <ref>PMID:11728527</ref> <ref>PMID:12945883</ref> <ref>PMID:15650540</ref> <ref>PMID:17393015</ref> <ref>PMID:19135706</ref>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN]] Factor Xa is a vitamin K-dependent glycoprotein that converts prothrombin to thrombin in the presence of factor Va, calcium and phospholipid during blood clotting.
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[https://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN] Factor Xa is a vitamin K-dependent glycoprotein that converts prothrombin to thrombin in the presence of factor Va, calcium and phospholipid during blood clotting.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Coagulation factor Xa]]
 
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chan, C]]
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[[Category: Chan C]]
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[[Category: Convery, M A]]
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[[Category: Convery MA]]
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[[Category: Hamblin, J N]]
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[[Category: Hamblin JN]]
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[[Category: Senger, S]]
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[[Category: Senger S]]
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[[Category: Toomey, J R]]
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[[Category: Toomey JR]]
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[[Category: Watson, N S]]
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[[Category: Watson NS]]
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[[Category: Young, R J]]
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[[Category: Young RJ]]
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[[Category: Hydrolase]]
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[[Category: Inhibitor]]
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Revision as of 08:01, 3 May 2023

Factor Xa complex with GTC000401

PDB ID 4y76

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