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| <StructureSection load='4z8x' size='340' side='right'caption='[[4z8x]], [[Resolution|resolution]] 3.25Å' scene=''> | | <StructureSection load='4z8x' size='340' side='right'caption='[[4z8x]], [[Resolution|resolution]] 3.25Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4z8x]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z8X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Z8X FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4z8x]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z8X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Z8X FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ww0|4ww0]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4z8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z8x OCA], [https://pdbe.org/4z8x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4z8x RCSB], [https://www.ebi.ac.uk/pdbsum/4z8x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4z8x ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ftsH, aq_936 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4z8x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z8x OCA], [http://pdbe.org/4z8x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4z8x RCSB], [http://www.ebi.ac.uk/pdbsum/4z8x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4z8x ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/FTSH_AQUAE FTSH_AQUAE]] Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity).[HAMAP-Rule:MF_01458] | + | [https://www.uniprot.org/uniprot/FTSH_AQUAE FTSH_AQUAE] Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity).[HAMAP-Rule:MF_01458] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Aquae]] | + | [[Category: Aquifex aeolicus VF5]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Baumann, U]] | + | [[Category: Baumann U]] |
- | [[Category: Baumgartner, R]] | + | [[Category: Baumgartner R]] |
- | [[Category: Bieniossek, C]] | + | [[Category: Bieniossek C]] |
- | [[Category: Lanz, M]] | + | [[Category: Lanz M]] |
- | [[Category: Schacherl, M]] | + | [[Category: Schacherl M]] |
- | [[Category: Vostrukhina, M]] | + | [[Category: Vostrukhina M]] |
- | [[Category: Atp]]
| + | |
- | [[Category: Ftsh]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Intracellular protein degradation]]
| + | |
- | [[Category: Metalloprotease]]
| + | |
| Structural highlights
Function
FTSH_AQUAE Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity).[HAMAP-Rule:MF_01458]
Publication Abstract from PubMed
The crystal structure of a truncated, soluble quadruple mutant of FtsH from Aquifex aeolicus comprising the AAA and protease domains has been determined at 2.96 A resolution in space group I222. The protein crystallizes as a hexamer, with the protease domain forming layers in the ab plane. Contacts between these layers are mediated by the AAA domains. These are highly disordered in one crystal form, but are clearly visible in a related form with a shorter c axis. Here, adenosine diphosphate (ADP) is bound to each subunit and the AAA ring exhibits twofold symmetry. The arrangement is different from the ADP-bound state of an analogously truncated, soluble FtsH construct from Thermotoga maritima. The pore is completely closed and the phenylalanine residues in the pore line a contiguous path. The protease hexamer is very similar to those described for other FtsH structures. To resolve certain open issues regarding a conserved glycine in the linker between the AAA and protease domains, as well as the active-site switch beta-strand, mutations have been introduced in the full-length membrane-bound protein. Activity analysis of these point mutants reveals the crucial importance of these residues for proteolytic activity and is in accord with previous interpretation of the active-site switch and the importance of the linker glycine residue.
The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.,Vostrukhina M, Popov A, Brunstein E, Lanz MA, Baumgartner R, Bieniossek C, Schacherl M, Baumann U Acta Crystallogr D Biol Crystallogr. 2015 Jun;71(Pt 6):1307-18. doi:, 10.1107/S1399004715005945. Epub 2015 May 14. PMID:26057670[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Vostrukhina M, Popov A, Brunstein E, Lanz MA, Baumgartner R, Bieniossek C, Schacherl M, Baumann U. The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer. Acta Crystallogr D Biol Crystallogr. 2015 Jun;71(Pt 6):1307-18. doi:, 10.1107/S1399004715005945. Epub 2015 May 14. PMID:26057670 doi:http://dx.doi.org/10.1107/S1399004715005945
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