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6hmz

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Current revision (11:33, 24 January 2024) (edit) (undo)
 
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<StructureSection load='6hmz' size='340' side='right'caption='[[6hmz]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
<StructureSection load='6hmz' size='340' side='right'caption='[[6hmz]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6hmz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brana Brana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HMZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6hmz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Brassica_napus Brassica napus] and [https://en.wikipedia.org/wiki/Tolypocladium_inflatum Tolypocladium inflatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HMZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ABA:ALPHA-AMINOBUTYRIC+ACID'>ABA</scene>, <scene name='pdbligand=BMT:4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE'>BMT</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=MLE:N-METHYLLEUCINE'>MLE</scene>, <scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene>, <scene name='pdbligand=SAR:SARCOSINE'>SAR</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ABA:ALPHA-AMINOBUTYRIC+ACID'>ABA</scene>, <scene name='pdbligand=BMT:4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE'>BMT</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MLE:N-METHYLLEUCINE'>MLE</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene>, <scene name='pdbligand=SAR:SARCOSINE'>SAR</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BnaA09g35540D, GSBRNA2T00037123001 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3708 BRANA])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hmz OCA], [https://pdbe.org/6hmz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hmz RCSB], [https://www.ebi.ac.uk/pdbsum/6hmz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hmz ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hmz OCA], [http://pdbe.org/6hmz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hmz RCSB], [http://www.ebi.ac.uk/pdbsum/6hmz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hmz ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0A078GRH6_BRANA A0A078GRH6_BRANA]] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.[RuleBase:RU363019]
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[https://www.uniprot.org/uniprot/A0A078GRH6_BRANA A0A078GRH6_BRANA] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.[RuleBase:RU363019]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6hmz" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6hmz" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Peptidyl-prolyl cis-trans isomerase 3D structures|Peptidyl-prolyl cis-trans isomerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Brana]]
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[[Category: Brassica napus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Peptidylprolyl isomerase]]
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[[Category: Tolypocladium inflatum]]
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[[Category: Betzel, C]]
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[[Category: Betzel C]]
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[[Category: Falke, S]]
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[[Category: Falke S]]
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[[Category: Garbe, M]]
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[[Category: Garbe M]]
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[[Category: Hanhart, P]]
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[[Category: Hanhart P]]
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[[Category: Kehr, J]]
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[[Category: Kehr J]]
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[[Category: Thiess, M]]
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[[Category: Thiess M]]
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[[Category: Cyclophilin diversity]]
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[[Category: Cyclosporin some]]
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[[Category: Cyp-like domain]]
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[[Category: Isomerase]]
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[[Category: Peptidyl-prolyl cis/trans isomerase]]
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[[Category: Phloem sap]]
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Current revision

Crystal Structure of a Single-Domain Cyclophilin from Brassica napus Phloem Sap

PDB ID 6hmz

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