This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6po4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:32, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6po4' size='340' side='right'caption='[[6po4]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='6po4' size='340' side='right'caption='[[6po4]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6po4]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PO4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6PO4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6po4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_PittII Haemophilus influenzae PittII]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6PO4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6PO4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=BO3:BORIC+ACID'>BO3</scene>, <scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosylhomocysteine_nucleosidase Adenosylhomocysteine nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.9 3.2.2.9] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=BO3:BORIC+ACID'>BO3</scene>, <scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6po4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6po4 OCA], [http://pdbe.org/6po4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6po4 RCSB], [http://www.ebi.ac.uk/pdbsum/6po4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6po4 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6po4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6po4 OCA], [https://pdbe.org/6po4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6po4 RCSB], [https://www.ebi.ac.uk/pdbsum/6po4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6po4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/A0A0E1SMD9_HAEIF A0A0E1SMD9_HAEIF]] Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively.[HAMAP-Rule:MF_01684][SAAS:SAAS00064815]
+
[https://www.uniprot.org/uniprot/A0A0E1SMD9_HAEIF A0A0E1SMD9_HAEIF] Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively.[HAMAP-Rule:MF_01684][SAAS:SAAS00064815]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenosylhomocysteine nucleosidase]]
+
[[Category: Haemophilus influenzae PittII]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Cardona-Correa A]]
-
[[Category: Cardona-Correa, A]]
+
[[Category: Dubrovska I]]
-
[[Category: Dubrovska, I]]
+
[[Category: Grimshaw S]]
-
[[Category: Grimshaw, S]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G]]
+
[[Category: Satchell KJF]]
-
[[Category: Satchell, K J.F]]
+
[[Category: Shuvalova L]]
-
[[Category: Shuvalova, L]]
+
-
[[Category: 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase]]
+
-
[[Category: Csgid]]
+
-
[[Category: Hydrolase]]
+

Current revision

2.1 Angstrom Resolution Crystal Structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (mtnN) from Haemophilus influenzae PittII.

PDB ID 6po4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools