This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

1fvp

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 10:45, 19 May 2021

FLAVOPROTEIN 390

Structural highlights

1fvp is a 2 chain structure with sequence from "acinetobacter_phosphorescens"_brisou_1955 "acinetobacter phosphorescens" brisou 1955. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The three-dimensional structure of a flavoprotein, FP(390), from a luminescent bacterium, Photobacterium phosphoreum, solved by the molecular-replacement method, was refined to an R factor of 24.0% for 17 433 independent reflections, from 6.0 to 2.7 A resolution, collected by synchrotron radiation. The asymmetric unit of the crystal (space group P4(3)22, a = b = 76.8 and c = 242 A) contains two monomer molecules related by a non-crystallographic twofold axis to form a dimer. There are two Q-flavin [flavin mononucleotide (FMN) with myristic acid] molecules in FP(390) monomer. One of them is located at the interface of dimer which is bound to both monomer and the another is at the molecular surface. The electron density of myristic acids of Q-flavins at the dimer interface in both monomer are weak and unclear, showing the possibility that the Q-flavins bound in this site are not a single species but a mixture of two components, 6-(3"-myristic acid)-FMN and 6-(4"- myristic acid)-FMN.

Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution.,Kita A, Kasai S, Miyata M, Miki K Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):77-86. PMID:15299728^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Kita A, Kasai S, Miyata M, Miki K. Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution. Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):77-86. PMID:15299728 doi:10.1107/S0907444995009796

1 Structural highlights
2 Evolutionary Conservation
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1fvp"

Categories: Acinetobacter phosphorescens brisou 1955 | Large Structures | Kita, A | Miki, K | Flavin-binding protein

@@ Line 3: / Line 3: @@
 <StructureSection load='1fvp' size='340' side='right'caption='[[1fvp]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1fvp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"acinetobacter_phosphorescens"_brisou_1955 "acinetobacter phosphorescens" brisou 1955]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FVP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1FVP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1fvp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"acinetobacter_phosphorescens"_brisou_1955 "acinetobacter phosphorescens" brisou 1955]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FVP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMA:6-(3-TETRADECANOIC+ACID)+FLAVINE+MONONUCLEOTIDE'>FMA</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMA:6-(3-TETRADECANOIC+ACID)+FLAVINE+MONONUCLEOTIDE'>FMA</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fvp OCA], [http://pdbe.org/1fvp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1fvp RCSB], [http://www.ebi.ac.uk/pdbsum/1fvp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1fvp ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fvp OCA], [https://pdbe.org/1fvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fvp RCSB], [https://www.ebi.ac.uk/pdbsum/1fvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fvp ProSAT]</span></td></tr>
 </table>
 == Evolutionary Conservation ==

1fvp

From Proteopedia

Revision as of 10:45, 19 May 2021

FLAVOPROTEIN 390

Structural highlights

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox