3k20

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:03, 6 November 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3k20' size='340' side='right'caption='[[3k20]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='3k20' size='340' side='right'caption='[[3k20]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3k20]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_diphtheriae"_kruse_in_flugge_1886 "bacillus diphtheriae" kruse in flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K20 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K20 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3k20]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K20 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vzj|2vzj]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k20 OCA], [https://pdbe.org/3k20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k20 RCSB], [https://www.ebi.ac.uk/pdbsum/3k20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k20 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DIP1437 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1717 "Bacillus diphtheriae" Kruse in Flugge 1886])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k20 OCA], [http://pdbe.org/3k20 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k20 RCSB], [http://www.ebi.ac.uk/pdbsum/3k20 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k20 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6NGS1_CORDI Q6NGS1_CORDI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k20_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k20_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus diphtheriae kruse in flugge 1886]]
+
[[Category: Corynebacterium diphtheriae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Ciccosanti, C]]
+
[[Category: Ciccosanti C]]
-
[[Category: Everett, J K]]
+
[[Category: Everett JK]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Kuzin, A]]
+
[[Category: Kuzin A]]
-
[[Category: Lew, S]]
+
[[Category: Lew S]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Nair R]]
-
[[Category: Nair, R]]
+
[[Category: Rost B]]
-
[[Category: Rost, B]]
+
[[Category: Sahdev S]]
-
[[Category: Sahdev, S]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Wang H]]
-
[[Category: Wang, H]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Cdr100d]]
+
-
[[Category: Nesg]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Q6ngsi_cordi]]
+

Current revision

X-ray structure of oxidoreductase from corynebacterium diphtheriae,hexagonal crystal form. northeast structural genomics consortium target cdr100d

PDB ID 3k20

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k20"
Personal tools