This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5fst

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:22, 26 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5fst' size='340' side='right'caption='[[5fst]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
<StructureSection load='5fst' size='340' side='right'caption='[[5fst]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5fst]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FST OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FST FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5fst]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FST OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FST FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=KR:KRYPTON'>KR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fsj|5fsj]], [[5fsp|5fsp]], [[5fss|5fss]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=KR:KRYPTON'>KR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fst FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fst OCA], [https://pdbe.org/5fst PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fst RCSB], [https://www.ebi.ac.uk/pdbsum/5fst PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fst ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fst FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fst OCA], [http://pdbe.org/5fst PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fst RCSB], [http://www.ebi.ac.uk/pdbsum/5fst PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fst ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
==See Also==
==See Also==
Line 20: Line 19:
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lysozyme]]
+
[[Category: Carpentier P]]
-
[[Category: Carpentier, P]]
+
[[Category: Colloc'h N]]
-
[[Category: Lafumat, B]]
+
[[Category: Lafumat B]]
-
[[Category: Linden, P van der]]
+
[[Category: Mueller-Dieckmann C]]
-
[[Category: Mueller-Dieckmann, C]]
+
[[Category: Prange T]]
-
[[Category: Prange, T]]
+
[[Category: Royant A]]
-
[[Category: Royant, A]]
+
[[Category: Van der Linden P]]
-
[[Category: H, N Colloc]]
+
-
[[Category: Flash freezing]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Krypton]]
+
-
[[Category: Muramidase]]
+
-
[[Category: Pressure]]
+

Current revision

Structure of lysozyme prepared by the 'soak-and-freeze' method under 100 bar of krypton pressure

PDB ID 5fst

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools