6o3c
From Proteopedia
(Difference between revisions)
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<StructureSection load='6o3c' size='340' side='right'caption='[[6o3c]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='6o3c' size='340' side='right'caption='[[6o3c]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[6o3c]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6o3c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lama_glama Lama glama] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6O3C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6O3C FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=LKD:3-chloro-4,7-difluoro-N-{[2-methoxy-5-(pyridin-4-yl)phenyl]methyl}-N-[trans-4-(methylamino)cyclohexyl]-1-benzothiophene-2-carboxamide'>LKD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=LKD:3-chloro-4,7-difluoro-N-{[2-methoxy-5-(pyridin-4-yl)phenyl]methyl}-N-[trans-4-(methylamino)cyclohexyl]-1-benzothiophene-2-carboxamide'>LKD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6o3c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6o3c OCA], [https://pdbe.org/6o3c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6o3c RCSB], [https://www.ebi.ac.uk/pdbsum/6o3c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6o3c ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/SMO_MOUSE SMO_MOUSE] G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO) (By similarity). Required for the accumulation of KIF7, GLI2 and GLI3 in the cilia. Interacts with DLG5 at the ciliary base to induce the accumulation of KIF7 and GLI2 at the ciliary tip for GLI2 activation (PubMed:25644602).[UniProtKB:Q99835]<ref>PMID:25644602</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Lama glama]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Mus musculus]] |
- | [[Category: Beachy | + | [[Category: Beachy PA]] |
- | [[Category: Deshpande | + | [[Category: Deshpande IS]] |
- | [[Category: Dror | + | [[Category: Dror RO]] |
- | [[Category: Faust | + | [[Category: Faust B]] |
- | [[Category: Ha | + | [[Category: Ha B]] |
- | [[Category: Hedeen | + | [[Category: Hedeen D]] |
- | [[Category: Latorraca | + | [[Category: Latorraca NR]] |
- | [[Category: Liang | + | [[Category: Liang J]] |
- | [[Category: Manglik | + | [[Category: Manglik A]] |
- | [[Category: Myers | + | [[Category: Myers BR]] |
- | [[Category: Roberts | + | [[Category: Roberts KJ]] |
- | [[Category: Zhang | + | [[Category: Zhang Y]] |
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Revision as of 07:03, 11 October 2023
Crystal structure of active Smoothened bound to SAG21k, cholesterol, and NbSmo8
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Categories: Lama glama | Large Structures | Mus musculus | Beachy PA | Deshpande IS | Dror RO | Faust B | Ha B | Hedeen D | Latorraca NR | Liang J | Manglik A | Myers BR | Roberts KJ | Zhang Y