1kf1

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==Structure and Packing of Human Telomeric DNA==
==Structure and Packing of Human Telomeric DNA==
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<StructureSection load='1kf1' size='340' side='right'caption='[[1kf1]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='1kf1' size='340' side='right'caption='[[1kf1]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1kf1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KF1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KF1 FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KF1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KF1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kf1 OCA], [https://pdbe.org/1kf1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kf1 RCSB], [https://www.ebi.ac.uk/pdbsum/1kf1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kf1 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kf1 OCA], [http://pdbe.org/1kf1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1kf1 RCSB], [http://www.ebi.ac.uk/pdbsum/1kf1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1kf1 ProSAT]</span></td></tr>
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</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Telomeric ends of chromosomes, which comprise noncoding repeat sequences of guanine-rich DNA, are fundamental in protecting the cell from recombination and degradation. Disruption of telomere maintenance leads to eventual cell death, which can be exploited for therapeutic intervention in cancer. Telomeric DNA sequences can form four-stranded (quadruplex) structures, which may be involved in the structure of telomere ends. Here we describe the crystal structure of a quadruplex formed from four consecutive human telomeric DNA repeats and grown at a K(+) concentration that approximates its intracellular concentration. K(+) ions are observed in the structure. The folding and appearance of the DNA in this intramolecular quadruplex is fundamentally different from the published Na(+)-containing quadruplex structures. All four DNA strands are parallel, with the three linking trinucleotide loops positioned on the exterior of the quadruplex core, in a propeller-like arrangement. The adenine in each TTA linking trinucleotide loop is swung back so that it intercalates between the two thymines. This DNA structure suggests a straightforward path for telomere folding and unfolding, as well as ways in which it can recognize telomere-associated proteins.
 
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Crystal structure of parallel quadruplexes from human telomeric DNA.,Parkinson GN, Lee MP, Neidle S Nature. 2002 Jun 20;417(6891):876-80. Epub 2002 May 26. PMID:12050675<ref>PMID:12050675</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1kf1" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lee, M P.H]]
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[[Category: Lee MPH]]
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[[Category: Neidle, S]]
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[[Category: Neidle S]]
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[[Category: Parkinson, G N]]
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[[Category: Parkinson GN]]
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[[Category: Dna]]
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[[Category: Double chain reversal loop]]
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[[Category: Human telomere sequence]]
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[[Category: Parallel stranded]]
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[[Category: Quadruplex dna]]
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Revision as of 05:50, 28 April 2021

Structure and Packing of Human Telomeric DNA

PDB ID 1kf1

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