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3d6s
From Proteopedia
(Difference between revisions)
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<StructureSection load='3d6s' size='340' side='right'caption='[[3d6s]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='3d6s' size='340' side='right'caption='[[3d6s]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d6s]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3d6s]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dermatophagoides_farinae Dermatophagoides farinae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D6S FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peptidase_1_(mite) Peptidase 1 (mite)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.65 3.4.22.65] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d6s OCA], [https://pdbe.org/3d6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d6s RCSB], [https://www.ebi.ac.uk/pdbsum/3d6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d6s ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/PEPT1_DERFA PEPT1_DERFA]] Thiol protease that hydrolyzes proteins, with a preference for Phe or basic residues. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Revision as of 07:55, 2 February 2022
Crystal structure of mite allergen Der f 1
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Categories: Dermatophagoides farinae | Large Structures | Chapman, M D | Chruszcz, M | Minor, W | Pomes, A | Vailes, L D | Allergen | Allergy | Dust mite | Glycoprotein | Hydrolase | Protease | Secreted | Thiol protease | Zymogen

