6qfo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6qfo is ON HOLD until Paper Publication
+
==EngBF DARPin Fusion 9b 3G124==
 +
<StructureSection load='6qfo' size='340' side='right'caption='[[6qfo]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6qfo]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QFO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QFO FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4qev|4qev]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qfo OCA], [http://pdbe.org/6qfo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qfo RCSB], [http://www.ebi.ac.uk/pdbsum/6qfo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qfo ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
To overcome the laborious identification of crystallisation conditions for protein X-ray crystallography, we developed a method where the examined protein is immobilised as a guest molecule in a universal host lattice. We applied crystal engineering to create a generic crystalline host lattice under reproducible, predefined conditions and analysed the structures of target guest molecules of different size, namely two 15-mer peptides and green fluorescent protein (sfGFP). A fusion protein with an N-terminal endo-alpha-N-acetylgalactosaminidase (EngBF) domain and a C-terminal designed ankyrin repeat protein (DARPin) domain establishes the crystal lattice. The target is recruited into the host lattice, always in the same crystal form, through binding to the DARPin. The target structures can be determined rapidly from difference Fourier maps, whose quality depends on the size of the target and the orientation of the DARPin.
-
Authors: Ernst, P., Pluckthun, A., Mittl, P.R.E.
+
Structural analysis of biological targets by host:guest crystal lattice engineering.,Ernst P, Pluckthun A, Mittl PRE Sci Rep. 2019 Oct 23;9(1):15199. doi: 10.1038/s41598-019-51017-y. PMID:31645583<ref>PMID:31645583</ref>
-
Description: EngBF DARPin Fusion 9b 3G124
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Pluckthun, A]]
+
<div class="pdbe-citations 6qfo" style="background-color:#fffaf0;"></div>
-
[[Category: Mittl, P.R.E]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Ernst, P]]
[[Category: Ernst, P]]
 +
[[Category: Mittl, P R.E]]
 +
[[Category: Pluckthun, A]]
 +
[[Category: Chaperone]]
 +
[[Category: Crystallization chaperone]]
 +
[[Category: Darpin]]
 +
[[Category: Hydrolase]]
 +
[[Category: Protein fusion]]

Revision as of 06:48, 6 November 2019

EngBF DARPin Fusion 9b 3G124

PDB ID 6qfo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools