This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6se4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:40, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6se4' size='340' side='right'caption='[[6se4]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
<StructureSection load='6se4' size='340' side='right'caption='[[6se4]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6se4]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SE4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6SE4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6se4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SE4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SE4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=L8W:(+)-JD1'>L8W</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6se4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6se4 OCA], [http://pdbe.org/6se4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6se4 RCSB], [http://www.ebi.ac.uk/pdbsum/6se4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6se4 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=L8W:(+)-JD1'>L8W</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6se4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6se4 OCA], [https://pdbe.org/6se4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6se4 RCSB], [https://www.ebi.ac.uk/pdbsum/6se4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6se4 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
-
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
+
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
+
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
 +
 
 +
==See Also==
 +
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Bountra, C]]
+
[[Category: Bountra C]]
-
[[Category: Delft, F von]]
+
[[Category: Edwards AM]]
-
[[Category: Edwards, A M]]
+
[[Category: Filippakopoulos P]]
-
[[Category: Filippakopoulos, P]]
+
[[Category: Hassell-Hart S]]
-
[[Category: Hassell-Hart, S]]
+
[[Category: Krojer T]]
-
[[Category: Krojer, T]]
+
[[Category: Picaud S]]
-
[[Category: Picaud, S]]
+
[[Category: Spencer J]]
-
[[Category: Structural genomic]]
+
[[Category: Von Delft F]]
-
[[Category: Spencer, J]]
+
-
[[Category: Brd4]]
+
-
[[Category: Bromodomain]]
+
-
[[Category: Bromodomain-containing protein 4 isoform long]]
+
-
[[Category: Organometallic bet bromodomain inhibitor]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Sgc]]
+

Current revision

Crystal Structure of the first bromodomain of human BRD4 in complex with (+)-JD1, an Organometallic BET Bromodomain Inhibitor

PDB ID 6se4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools