6a6j

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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6a6j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6a6j OCA], [http://pdbe.org/6a6j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6a6j RCSB], [http://www.ebi.ac.uk/pdbsum/6a6j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6a6j ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6a6j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6a6j OCA], [http://pdbe.org/6a6j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6a6j RCSB], [http://www.ebi.ac.uk/pdbsum/6a6j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6a6j ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The maternal-to-zygotic transition (MZT) is a conserved and fundamental process during which the maternal environment is converted to an environment of embryonic-driven development through dramatic reprogramming. However, how maternally supplied transcripts are dynamically regulated during MZT remains largely unknown. Herein, through genome-wide profiling of RNA 5-methylcytosine (m(5)C) modification in zebrafish early embryos, we found that m(5)C-modified maternal mRNAs display higher stability than non-m(5)C-modified mRNAs during MZT. We discovered that Y-box binding protein 1 (Ybx1) preferentially recognizes m(5)C-modified mRNAs through pi-pi interactions with a key residue, Trp45, in Ybx1's cold shock domain (CSD), which plays essential roles in maternal mRNA stability and early embryogenesis of zebrafish. Together with the mRNA stabilizer Pabpc1a, Ybx1 promotes the stability of its target mRNAs in an m(5)C-dependent manner. Our study demonstrates an unexpected mechanism of RNA m(5)C-regulated maternal mRNA stabilization during zebrafish MZT, highlighting the critical role of m(5)C mRNA modification in early development.
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RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay.,Yang Y, Wang L, Han X, Yang WL, Zhang M, Ma HL, Sun BF, Li A, Xia J, Chen J, Heng J, Wu B, Chen YS, Xu JW, Yang X, Yao H, Sun J, Lyu C, Wang HL, Huang Y, Sun YP, Zhao YL, Meng A, Ma J, Liu F, Yang YG Mol Cell. 2019 Jul 16. pii: S1097-2765(19)30490-3. doi:, 10.1016/j.molcel.2019.06.033. PMID:31399345<ref>PMID:31399345</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6a6j" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Revision as of 06:25, 21 August 2019

Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA

PDB ID 6a6j

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