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6dzx

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Crystal structure of the N. meningitides methionine-binding protein in its D-methionine bound conformation.

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 <StructureSection load='6dzx' size='340' side='right'caption='[[6dzx]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6dzx]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_alpha153 Neisseria meningitidis alpha153]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DZX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DZX FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6dzx]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_alpha153 Neisseria meningitidis alpha153]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DZX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DZX FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MED:D-METHIONINE'>MED</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.678&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sfbA, NME_0028 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=663926 Neisseria meningitidis alpha153])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MED:D-METHIONINE'>MED</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dzx OCA], [http://pdbe.org/6dzx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dzx RCSB], [http://www.ebi.ac.uk/pdbsum/6dzx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dzx ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dzx OCA], [https://pdbe.org/6dzx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dzx RCSB], [https://www.ebi.ac.uk/pdbsum/6dzx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dzx ProSAT]</span></td></tr>
 </table>
-<div style="background-color:#fffaf0;">
+== Function ==
-== Publication Abstract from PubMed ==
+[https://www.uniprot.org/uniprot/C6S9R8_NEIME C6S9R8_NEIME]
-The bacterial periplasmic methionine-binding protein MetQ is involved in the import of methionine by the cognate MetNI methionine ABC transporter. The MetNIQ system is one of the few members of the ABC importer family that has been structurally characterized in multiple conformational states. Critical missing elements in the structural analysis of MetNIQ are the structure of the substrate-free form of MetQ, and detailing how MetQ binds multiple methionine derivatives, including both L- and D-methionine isomers. In this study, we report the structures of the Neisseria meningitides MetQ in substrate-free form and in complexes with L-methionine and with D-methionine, along with the associated binding constants determined by isothermal titration calorimetry. Structures of the substrate-free (N238A) and substrate-bound N. meningitides MetQ are related by a "Venus-fly trap" hinge-type movement of the two domains accompanying methionine binding and dissociation. L-methionine and D-methionine bind to the same site on MetQ, and this study emphasizes the important role of asparagine 238 in ligand binding and affinity. A thermodynamic analysis demonstrates that ligand-free MetQ associates with the ATP bound form of MetNI ~40 times more tightly than does liganded MetQ, consistent with the necessity of dissociating methionine from MetQ for transport to occur. This article is protected by copyright. All rights reserved.
-Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to L- and D-methionine isomers.,Nguyen PT, Lai JY, Kaiser JT, Rees DC Protein Sci. 2019 Jul 26. doi: 10.1002/pro.3694. PMID:31348565<ref>PMID:31348565</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 6dzx" style="background-color:#fffaf0;"></div>
-== References ==
-<references/>
 __TOC__
 </StructureSection>
 [[Category: Large Structures]]
 [[Category: Neisseria meningitidis alpha153]]
-[[Category: Kaiser, J T]]
+[[Category: Kaiser JT]]
-[[Category: Lai, J Y]]
+[[Category: Lai JY]]
-[[Category: Nguyen, P T]]
+[[Category: Nguyen PT]]
-[[Category: Rees, D C]]
+[[Category: Rees DC]]
-[[Category: Methionine-binding protein]]
-[[Category: Protein binding]]

6dzx

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Crystal structure of the N. meningitides methionine-binding protein in its D-methionine bound conformation.

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