This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6kpk
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==309 K cryoEM structure of Sso-KARI in complex with Mg2+== | |
| + | <StructureSection load='6kpk' size='340' side='right'caption='[[6kpk]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6kpk]] is a 12 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KPK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6KPK FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6kou|6kou]]</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6kpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kpk OCA], [http://pdbe.org/6kpk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6kpk RCSB], [http://www.ebi.ac.uk/pdbsum/6kpk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6kpk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Protein functions are temperature-dependent, but protein structures are usually solved at a single (often low) temperature because of limitations on the conditions of crystal growth or protein vitrification. Here we demonstrate the feasibility of solving cryo-EM structures of proteins vitrified at high temperatures, solve 12 structures of an archaeal ketol-acid reductoisomerase (KARI) vitrified at 4-70 degrees C, and show that structures of both the Mg(2+) form (KARI:2Mg(2+)) and its ternary complex (KARI:2Mg(2+):NADH:inhibitor) are temperature-dependent in correlation with the temperature dependence of enzyme activity. Furthermore, structural analyses led to dissection of the induced-fit mechanism into ligand-induced and temperature-induced effects and to capture of temperature-resolved intermediates of the temperature-induced conformational change. The results also suggest that it is preferable to solve cryo-EM structures of protein complexes at functional temperatures. These studies should greatly expand the landscapes of protein structure-function relationships and enhance the mechanistic analysis of enzymatic functions. | ||
| - | + | Temperature-Resolved Cryo-EM Uncovers Structural Bases of Temperature-Dependent Enzyme Functions.,Chen CY, Chang YC, Lin BL, Huang CH, Tsai MD J Am Chem Soc. 2019 Dec 26;141(51):19983-19987. doi: 10.1021/jacs.9b10687. Epub, 2019 Dec 16. PMID:31829582<ref>PMID:31829582</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 6kpk" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: Tsai, M | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chang, Y C]] | ||
| + | [[Category: Chen, C Y]] | ||
| + | [[Category: Huang, C H]] | ||
| + | [[Category: Lin, B L]] | ||
| + | [[Category: Tsai, M D]] | ||
| + | [[Category: Complex]] | ||
| + | [[Category: Isomerase]] | ||
Revision as of 10:07, 27 March 2020
309 K cryoEM structure of Sso-KARI in complex with Mg2+
| |||||||||||
Categories: Large Structures | Chang, Y C | Chen, C Y | Huang, C H | Lin, B L | Tsai, M D | Complex | Isomerase
