|
|
Line 3: |
Line 3: |
| <StructureSection load='6p1g' size='340' side='right'caption='[[6p1g]], [[Resolution|resolution]] 2.05Å' scene=''> | | <StructureSection load='6p1g' size='340' side='right'caption='[[6p1g]], [[Resolution|resolution]] 2.05Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6p1g]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methylosinus_trichosporium_ob3b Methylosinus trichosporium ob3b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P1G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6P1G FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6p1g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylosinus_trichosporium_OB3b Methylosinus trichosporium OB3b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P1G FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CQW49_04640 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=595536 Methylosinus trichosporium OB3b])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6p1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p1g OCA], [http://pdbe.org/6p1g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p1g RCSB], [http://www.ebi.ac.uk/pdbsum/6p1g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p1g ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p1g OCA], [https://pdbe.org/6p1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p1g RCSB], [https://www.ebi.ac.uk/pdbsum/6p1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p1g ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A2D2CWX5_METTR A0A2D2CWX5_METTR] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 22: |
Line 24: |
| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Methylosinus trichosporium ob3b]] | + | [[Category: Methylosinus trichosporium OB3b]] |
- | [[Category: Fisher, O S]] | + | [[Category: Fisher OS]] |
- | [[Category: Rosenzweig, A C]] | + | [[Category: Rosenzweig AC]] |
- | [[Category: Chaperone]]
| + | |
- | [[Category: Copper binding protein]]
| + | |
- | [[Category: Metal binding protein]]
| + | |
| Structural highlights
Function
A0A2D2CWX5_METTR
Publication Abstract from PubMed
Copper is critically important for methanotrophic bacteria because their primary metabolic enzyme, particulate methane monooxygenase (pMMO), is copper-dependent. In addition to pMMO, many other copper proteins are encoded in the genomes of methanotrophs, including proteins that contain periplasmic copper-A chaperone (PCuAC) domains. Using bioinformatics analyses, we identified three distinct classes of PCuAC domain-containing proteins in methanotrophs, termed PmoF1, PmoF2, and PmoF3. PCuAC domains from other types of bacteria bind a single Cu(I) ion via an HxnMx21/22HxM motif, which is also present in PmoF3, but PmoF1 and PmoF2 lack this motif entirely. Instead, the PCuAC domains of PmoF1 and PmoF2 bind only Cu(II), and PmoF1 binds additional Cu(II) ions in a His-rich extension to its PCuAC domain. Crystal structures of the PmoF1 and PmoF2 PCuAC domains reveal that Cu(II) is coordinated by an N-terminal histidine brace Hx10H motif. This binding site is distinct from those of previously characterized PCuAC domains, but resembles copper centers in CopC proteins and lytic polysaccharide monooxygenase (LPMO) enzymes. Bioinformatics analysis of the entire PCuAC family revealed previously unappreciated diversity, including sequences that contain both the HxnMx21/22HxMand Hx10H motifs, and sequences that lack either set of copper-binding ligands. These findings provide the first characterization of an additional class of copper proteins from methanotrophs, further expand the PCuAC family, and afford new insight into the biological significance of histidine brace-mediated copper coordination.
PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.,Fisher OS, Sendzik MR, Ross MO, Lawton TJ, Hoffman BM, Rosenzweig AC J Biol Chem. 2019 Sep 16. pii: RA119.010093. doi: 10.1074/jbc.RA119.010093. PMID:31527086[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Fisher OS, Sendzik MR, Ross MO, Lawton TJ, Hoffman BM, Rosenzweig AC. PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper. J Biol Chem. 2019 Sep 16. pii: RA119.010093. doi: 10.1074/jbc.RA119.010093. PMID:31527086 doi:http://dx.doi.org/10.1074/jbc.RA119.010093
|