This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


DNA glycosylase 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 37: Line 37:
**[[1lqj]] – EcUDG<BR />
**[[1lqj]] – EcUDG<BR />
**[[1flz]] - EcUDG (mutant) <BR />
**[[1flz]] - EcUDG (mutant) <BR />
-
**[[1udh]], [[1udg]], [[5nnh]], [[5nn7]] – HsUDG - Herpes simplex virus<BR />
+
**[[1udh]], [[1udg]], [[5nnh]], [[5nn7]] – HhvUDG - Human herpesvirus<BR />
**[[2c2p]], [[2boo]] – DrUDG – ''Deinococcus radiodurans''<BR />
**[[2c2p]], [[2boo]] – DrUDG – ''Deinococcus radiodurans''<BR />
**[[2c2q]] – DrUDG (mutant) <BR />
**[[2c2q]] – DrUDG (mutant) <BR />
Line 54: Line 54:
**[[1uug]], [[1eui]], [[1lqg]], [[1lqm]] – EcUDG + UDG inhibitor protein <br />
**[[1uug]], [[1eui]], [[1lqg]], [[1lqm]] – EcUDG + UDG inhibitor protein <br />
**[[2uug]] – EcUDG (mutant) + UDG inhibitor protein <br />
**[[2uug]] – EcUDG (mutant) + UDG inhibitor protein <br />
-
**[[2j8x]] – UDG + UDG inhibitor protein – Epstein-Barr virus<br />
+
**[[2j8x]] – EBvUDG + UDG inhibitor protein – Epstein-Barr virus<br />
**[[2zhx]] – MtUDG + UDG inhibitor protein <br />
**[[2zhx]] – MtUDG + UDG inhibitor protein <br />
**[[3wdg]] – SaUDG + UDG inhibitor protein <br />
**[[3wdg]] – SaUDG + UDG inhibitor protein <br />
Line 73: Line 73:
**[[4qcb]] – VvUDG (mutant) + DNA<br />
**[[4qcb]] – VvUDG (mutant) + DNA<br />
**[[2ddg]], [[2dem]], [[2dp6]] – TtUDG + DNA + deoxyphosphono ribose<br />
**[[2ddg]], [[2dem]], [[2dp6]] – TtUDG + DNA + deoxyphosphono ribose<br />
-
**[[5nnu]] – HhUDG + DNA <br />
+
**[[5nnu]] – HhvUDG + DNA <br />
**[[6ajo]] – MsUDG + DNA<br />
**[[6ajo]] – MsUDG + DNA<br />
Line 87: Line 87:
**[[6ajp]] – MsUDG + deoxy-UMP <br />
**[[6ajp]] – MsUDG + deoxy-UMP <br />
**[[2d3y]] – TtUDG + Fe4S4 + deoxy-UMP <br />
**[[2d3y]] – TtUDG + Fe4S4 + deoxy-UMP <br />
-
**[[2c53]] – HsvUDG (mutant) + deoxyuridine<br />
+
**[[2c53]] – HhvUDG (mutant) + deoxyuridine<br />
**[[3cxm]] – UDG + Br-uracil – ''Leishmania naiffi''<br />
**[[3cxm]] – UDG + Br-uracil – ''Leishmania naiffi''<br />
Line 101: Line 101:
**[[5jks]], [[5jkt]] – VvUDG (mutant) + DNA polymerase processivity factor component A20 N terminal<br />
**[[5jks]], [[5jkt]] – VvUDG (mutant) + DNA polymerase processivity factor component A20 N terminal<br />
**[[4yig]] – VvUDG + DNA polymerase processivity factor component A20 N terminal + DNA<br />
**[[4yig]] – VvUDG + DNA polymerase processivity factor component A20 N terminal + DNA<br />
 +
**[[6lyj]] – EBvUDG + SAUGI <br />
 +
**[[6lyv]] – HhvUDG + SAUGI <br />
*Smug1 Uracil DG
*Smug1 Uracil DG
Line 119: Line 121:
**[[3ufj]] – hTDG core domain + DNA + fluoroluridine<br />
**[[3ufj]] – hTDG core domain + DNA + fluoroluridine<br />
**[[4fnc]], [[5hf7]] - hTDG + DNA + uridine derivative <br />
**[[4fnc]], [[5hf7]] - hTDG + DNA + uridine derivative <br />
-
**[[5jxy]], [[4z3a]], [[4xeg]] - hTDG + DNA + G/U analog<br />
+
**[[5jxy]], [[4z3a]], [[4xeg]], [[6u17]] - hTDG + DNA + G/U analog<br />
 +
**[[6u15]], [[6u16]] - hTDG (mutant) + DNA + G/U analog<br />
**[[5ff8]], [[5cys]], [[4z7z]], [[4z7b]], [[4z47]] - hTDG + DNA + deoxyribose<br />
**[[5ff8]], [[5cys]], [[4z7z]], [[4z7b]], [[4z47]] - hTDG + DNA + deoxyribose<br />
Line 204: Line 207:
**[[1pjj]] – LlFpg (mutant) + DNA containing abasic dideoxyribose<br />
**[[1pjj]] – LlFpg (mutant) + DNA containing abasic dideoxyribose<br />
**[[4cis]] – LlFpg + DNA containing oxoG derivative<br />
**[[4cis]] – LlFpg + DNA containing oxoG derivative<br />
-
**[[3twm]] – AtFpg + DNA containing abasic dideoxyribose<br />
 
**[[1pji]] – LlFpg + DNA containing 1,3-propanediol<br />
**[[1pji]] – LlFpg + DNA containing 1,3-propanediol<br />
**[[2xzf]], [[2xzu]] – LlFpg + DNA containing oxidized pyrimidine<br />
**[[2xzf]], [[2xzu]] – LlFpg + DNA containing oxidized pyrimidine<br />
**[[1tdz]], [[1xc8]], [[3c58]] – LlFpg + DNA containing Fapy-dG derivative<br />
**[[1tdz]], [[1xc8]], [[3c58]] – LlFpg + DNA containing Fapy-dG derivative<br />
 +
**[[6fl1]], [[6h0s]] – LlFpg (mutant) + DNA containing Fapy-dG derivative<br />
 +
**[[6rnm]], [[6rno]], [[6rnr]], [[6ro2]], [[6rok]], [[6rp0]], [[6rp7]] – LlFpg + DNA containing abasic dideoxyribose + inhibitor<br />
 +
**[[3twm]] – AtFpg + DNA containing abasic dideoxyribose<br />
**[[3a46]] – ApFpg + DNA containing abasic dideoxyribose<br />
**[[3a46]] – ApFpg + DNA containing abasic dideoxyribose<br />
**[[4nrw]] – ApFpg (mutant) + DNA containing abasic dideoxyribose<br />
**[[4nrw]] – ApFpg (mutant) + DNA containing abasic dideoxyribose<br />

Revision as of 08:00, 16 July 2020

3D Structures of DNA glycosylase

Updated on 16-July-2020


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

Retrieved from "http://52.214.119.220/wiki/index.php/DNA_glycosylase_3D_structures"
Personal tools