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5i5m

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Current revision (08:23, 23 August 2023) (edit) (undo)
 
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<StructureSection load='5i5m' size='340' side='right'caption='[[5i5m]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
<StructureSection load='5i5m' size='340' side='right'caption='[[5i5m]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5i5m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shedo Shedo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I5M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5I5M FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5i5m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_denitrificans_OS217 Shewanella denitrificans OS217]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I5M FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nosZ, Sden_2219 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=318161 SHEDO])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrous-oxide_reductase Nitrous-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.4 1.7.2.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i5m OCA], [https://pdbe.org/5i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i5m RCSB], [https://www.ebi.ac.uk/pdbsum/5i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i5m ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i5m OCA], [http://pdbe.org/5i5m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i5m RCSB], [http://www.ebi.ac.uk/pdbsum/5i5m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5i5m ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/Q12M27_SHEDO Q12M27_SHEDO]] Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide.[HAMAP-Rule:MF_00716]
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[https://www.uniprot.org/uniprot/Q12M27_SHEDO Q12M27_SHEDO] Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide.[HAMAP-Rule:MF_00716]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Nitrous-oxide reductase]]
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[[Category: Shewanella denitrificans OS217]]
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[[Category: Shedo]]
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[[Category: Einsle O]]
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[[Category: Einsle, O]]
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[[Category: Schneider LK]]
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[[Category: Schneider, L K]]
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[[Category: Nitrogen cycle nitrous oxide reductase beta-propeller apoprotein]]
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[[Category: Oxidoreductase]]
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Current revision

Shewanella denitrificans nitrous oxide reductase, Ca2+-reconstituted form

PDB ID 5i5m

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