This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5kda

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:45, 27 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5kda' size='340' side='right'caption='[[5kda]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5kda' size='340' side='right'caption='[[5kda]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5kda]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspte Aspte]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KDA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KDA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5kda]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_terreus Aspergillus terreus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KDA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KDA FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=GEN:GENISTEIN'>GEN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kcg|5kcg]], [[5kcl|5kcl]], [[5kcq|5kcq]], [[5kcy|5kcy]], [[5kd0|5kd0]], [[5kd6|5kd6]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=GEN:GENISTEIN'>GEN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ATEG_04999 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33178 ASPTE])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kda OCA], [https://pdbe.org/5kda PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kda RCSB], [https://www.ebi.ac.uk/pdbsum/5kda PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kda ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kda OCA], [http://pdbe.org/5kda PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kda RCSB], [http://www.ebi.ac.uk/pdbsum/5kda PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kda ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A1B0UHJ4_ASPTE A0A1B0UHJ4_ASPTE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspte]]
+
[[Category: Aspergillus terreus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Gao, B]]
+
[[Category: Gao B]]
-
[[Category: Sun, F]]
+
[[Category: Sun F]]
-
[[Category: Abba fold]]
+
-
[[Category: Aromatic prenyltransferase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4 in complex with dimethylallyl S-thiolodiphosphate and genistein

PDB ID 5kda

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools