Lipase 3D Structures
From Proteopedia
(Difference between revisions)
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== 3D Structures of Lipase == | == 3D Structures of Lipase == | ||
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*Eukaryote lipase: | *Eukaryote lipase: | ||
| - | **[[1hpl]] – hLip – horse <br /> | ||
**[[1hlg]] – hLip – human - gastric<br /> | **[[1hlg]] – hLip – human - gastric<br /> | ||
**[[1jmy]] – hBSSL <br /> | **[[1jmy]] – hBSSL <br /> | ||
| - | **[[1akn]] – | + | **[[1hpl]] – hLip – horse <br /> |
| - | **[[2bce]] - | + | **[[1akn]] – bBSSL – bovine <br /> |
| - | **[[1f6w]] - | + | **[[2bce]] - bBSSL (mutant) <br /> |
| + | **[[1f6w]] - bBSSL – catalytic domain<br /> | ||
**[[3o0d]] – Lip – ''Yarrowia lipolytica''<br /> | **[[3o0d]] – Lip – ''Yarrowia lipolytica''<br /> | ||
**[[4jei]] – YlLip (mutant)<br /> | **[[4jei]] – YlLip (mutant)<br /> | ||
**[[1gpl]] – Lip – Guinea pig<br /> | **[[1gpl]] – Lip – Guinea pig<br /> | ||
**[[3zpx]] – Lip – ''Ustilago maydis''<br /> | **[[3zpx]] – Lip – ''Ustilago maydis''<br /> | ||
| - | **[[6a0w]] – Lip catalytic domain – bread mold<br /> | + | **[[6a0w]], [[4l3w]] – Lip catalytic domain – bread mold<br /> |
**[[4zrd]], [[4zre]] – Lip1 (mutant) – dandruff fungus<br /> | **[[4zrd]], [[4zre]] – Lip1 (mutant) – dandruff fungus<br /> | ||
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**[[1cvl]] – Lip – ''Chromobacterium viscosum''<br /> | **[[1cvl]] – Lip – ''Chromobacterium viscosum''<br /> | ||
**[[1tic]] - Lip – ''Rhizopus oryzae''<br /> | **[[1tic]] - Lip – ''Rhizopus oryzae''<br /> | ||
| - | **[[3tgl]], [[4tgl]], [[1tgl]], [[6qpp]] – RmLip – ''Rhyzomucor miehei''<br /> | ||
| - | **[[6qpr]] – RmLip (mutant)<br /> | ||
**[[2zvd]] – PsLip - ''Pseudomonas sp.'' – open state<br /> | **[[2zvd]] – PsLip - ''Pseudomonas sp.'' – open state<br /> | ||
**[[2z8x]] - PsLip – extracellular<br /> | **[[2z8x]] - PsLip – extracellular<br /> | ||
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**[[3icw]] – CaLipB (mutant) + phosphonate<br /> | **[[3icw]] – CaLipB (mutant) + phosphonate<br /> | ||
**[[5x7k]] – SmLipB NBD <br /> | **[[5x7k]] – SmLipB NBD <br /> | ||
| - | **[[6isp]], [[6isq]], [[6isr]] – | + | **[[6isp]], [[6isq]], [[6isr]], [[6j1p]], [[6j1q]], [[6j1r]], [[6j1s]] – PaLipB (mutant) – ''Pseudozyma antarctica''<br /> |
| + | **[[6j1t]] – PaLipB (mutant) + product analog<br /> | ||
| + | **[[6tp8]] – PaLipB + substrate<br /> | ||
**[[6idy]] - AfLipB - ''Aspergillus fumigatus''<br /> | **[[6idy]] - AfLipB - ''Aspergillus fumigatus''<br /> | ||
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**[[1evq]] – AaEst2(LIPE) – ''Alicyclobacillus acidocaldarius''<br /> | **[[1evq]] – AaEst2(LIPE) – ''Alicyclobacillus acidocaldarius''<br /> | ||
**[[1u4n]] – AaEst2(LIPE) (mutant) <br /> | **[[1u4n]] – AaEst2(LIPE) (mutant) <br /> | ||
| + | **[[6keu]] – ElEstE53(HSL) – ''Erythrobacter longus''<br /> | ||
| + | **[[6kf1]], [[6kf5]], [[6kf7]] – ElEstE53(HSL) (mutant)<br /> | ||
*Putative lipases; Proteins with unknown function but structural similarity to lipase obtained in structural genomics projects. | *Putative lipases; Proteins with unknown function but structural similarity to lipase obtained in structural genomics projects. | ||
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**[[4zwn]] – yMAGL – yeast<br /> | **[[4zwn]] – yMAGL – yeast<br /> | ||
**[[4zxf]] – yMAGLip + substrate analog<br /> | **[[4zxf]] – yMAGLip + substrate analog<br /> | ||
| - | **[[6eic]] – MAGLip – ''Mycobacterium tuberculosis''<br /> | + | **[[6eic]], [[6k34]] – MAGLip – ''Mycobacterium tuberculosis''<br /> |
**[[5xk2]] – MAGLip – ''Aespergillus oryzae''<br /> | **[[5xk2]] – MAGLip – ''Aespergillus oryzae''<br /> | ||
| + | **[[6qe2]] – MAGLip – ''Plaeococcus ferrophilus''<br /> | ||
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| + | *Triacylglycerol lipase | ||
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| + | **[[6or3]] –TlTAGLip + palmitate<br /> | ||
| + | **[[3tgl]], [[4tgl]], [[1tgl]], [[6qpp]] – RmLip – ''Rhyzomucor miehei''<br /> | ||
| + | **[[6qpr]] – RmLip (mutant)<br /> | ||
*Lipase with substrate bound at active site | *Lipase with substrate bound at active site | ||
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*Lipase 2 or esterase/lipase | *Lipase 2 or esterase/lipase | ||
| - | **[[3v9a]],[[3g9t]], [[3g9u]], [[3g9z]], [[3h19]], [[3h1a]], [[3h1b]], [[3l1h]], [[3l1i]], [[3l1j]], [[3fak]], [[3h17]], [[3h18]], [[3dnm]], [[3k6k]] - E/L - uncultured bacteria<br /> | + | **[[3v9a]],[[3g9t]], [[3g9u]], [[3g9z]], [[3h19]], [[3h1a]], [[3h1b]], [[3l1h]], [[3l1i]], [[3l1j]], [[3fak]], [[3h17]], [[3h18]], [[3dnm]], [[3k6k]], [[6cl4]] - E/L - uncultured bacteria<br /> |
**[[3w9b]] - CaE/L <br /> | **[[3w9b]] - CaE/L <br /> | ||
**[[4v2i]] - E/L - ''Thalassospira''<br /> | **[[4v2i]] - E/L - ''Thalassospira''<br /> | ||
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**[[4bzz]], [[4bzw]] - LpE/L <br /> | **[[4bzz]], [[4bzw]] - LpE/L <br /> | ||
**[[6gup]] - AfE/L <br /> | **[[6gup]] - AfE/L <br /> | ||
| + | **[[6unv]] - E/L – ''Rasamsonia emersonii'' <br /> | ||
**[[1lgy]] – Lip2 – ''Rhizopus niveus''<br /> | **[[1lgy]] – Lip2 – ''Rhizopus niveus''<br /> | ||
**[[1gz7]] - CrLip2 <br /> | **[[1gz7]] - CrLip2 <br /> | ||
**[[4jei]] – Lip2 – ''Yarrowia lipolytica''<br /> | **[[4jei]] – Lip2 – ''Yarrowia lipolytica''<br /> | ||
**[[1thg]] – Lip2 – ''Geotrichum candidum''<br /> | **[[1thg]] – Lip2 – ''Geotrichum candidum''<br /> | ||
| + | **[[6ksi]] – SaLip2 – ''Staphylococcus aureus''<br /> | ||
| + | **[[6ksl]] – SaLip2 (mutant)<br /> | ||
| + | **[[6ksm]] – SaLip2 + drug<br /> | ||
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| + | *Lipoprotein lipase | ||
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| + | **[[6oau]], [[6e7k]], [[6oaz]], [[6ob0]] – hLPL + GPIHBP1<br /> | ||
| + | **[[6u7m]] – bLPL – Cryo EM<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 07:55, 1 September 2020
3D Structures of Lipase
Updated on 01-September-2020
