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| | <StructureSection load='6r6n' size='340' side='right'caption='[[6r6n]], [[Resolution|resolution]] 2.00Å' scene=''> | | <StructureSection load='6r6n' size='340' side='right'caption='[[6r6n]], [[Resolution|resolution]] 2.00Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6r6n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"candidatus_kuenenia_stuttgartiensis"_schmid_et_al._2000 "candidatus kuenenia stuttgartiensis" schmid et al. 2000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R6N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6R6N FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6r6n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Kuenenia_stuttgartiensis Candidatus Kuenenia stuttgartiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R6N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R6N FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KSMBR1_3082, kusta0087 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=174633 "Candidatus Kuenenia stuttgartiensis" Schmid et al. 2000]), KSMBR1_3083, kusta0088 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=174633 "Candidatus Kuenenia stuttgartiensis" Schmid et al. 2000])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6r6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r6n OCA], [http://pdbe.org/6r6n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6r6n RCSB], [http://www.ebi.ac.uk/pdbsum/6r6n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6r6n ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r6n OCA], [https://pdbe.org/6r6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r6n RCSB], [https://www.ebi.ac.uk/pdbsum/6r6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r6n ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q1Q7P4_KUEST Q1Q7P4_KUEST] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Candidatus kuenenia stuttgartiensis schmid et al. 2000]] | + | [[Category: Candidatus Kuenenia stuttgartiensis]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Akram, M]] | + | [[Category: Akram M]] |
| - | [[Category: Barends, T]] | + | [[Category: Barends T]] |
| - | [[Category: Cystein ligation]]
| + | |
| - | [[Category: Electron transport]]
| + | |
| - | [[Category: Heme-c]]
| + | |
| Structural highlights
Function
Q1Q7P4_KUEST
Publication Abstract from PubMed
Anaerobic ammonium oxidation (anammox) is a microbial process responsible for significant nitrogen loss from the oceans and other ecosystems. The redox reactions at the heart of anammox are catalyzed by large multiheme enzyme complexes that rely on small cytochrome c proteins for electron shuttling. Among the most highly abundant of these cytochromes is a unique heterodimeric complex composed of class I and class II c-type cytochrome called NaxLS, which has distinctive biochemical and spectroscopic properties. Here, we present the 1.7 A resolution crystal structure of this complex from the anammox organism Kuenenia stuttgartiensis (KsNaxLS). The structure reveals that the heme irons in each subunit exhibit a rare His/Cys ligation, which, as we show by substitution, causes the observed unusual spectral properties. Unlike its individual subunits, the KsNaxLS complex binds nitric oxide (NO) only at the distal heme side, forming 6cNO adducts. This is likely due to steric immobilization of the proximal heme binding motifs upon complex formation, a finding that may be of functional relevance, since NO is an intermediate in the central anammox metabolism. Pulldown experiments with K. stuttgartiensis cell-free extract showed that the KsNaxLS complex binds specifically to one of the central anammox enzyme complexes, hydrazine synthase, which uses NO as one of its substrates. It is therefore possible that the KsNaxLS complex plays a role in binding the volatile NO to retain it in the cell for transfer to hydrazine synthase. Alternatively, we propose that KsNaxLS may shuttle electrons to this enzyme complex.
A nitric oxide-binding heterodimeric cytochrome c complex from the anammox bacterium Kuenenia stuttgartiensis binds to hydrazine synthase.,Akram M, Reimann J, Dietl A, Menzel A, Versantvoort W, Kartal B, Jetten MSM, Barends TRM J Biol Chem. 2019 Sep 22. pii: RA119.008788. doi: 10.1074/jbc.RA119.008788. PMID:31548310[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Akram M, Reimann J, Dietl A, Menzel A, Versantvoort W, Kartal B, Jetten MSM, Barends TRM. A nitric oxide-binding heterodimeric cytochrome c complex from the anammox bacterium Kuenenia stuttgartiensis binds to hydrazine synthase. J Biol Chem. 2019 Sep 22. pii: RA119.008788. doi: 10.1074/jbc.RA119.008788. PMID:31548310 doi:http://dx.doi.org/10.1074/jbc.RA119.008788
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