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6is9

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Current revision (10:34, 27 March 2024) (edit) (undo)
 
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<StructureSection load='6is9' size='340' side='right'caption='[[6is9]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
<StructureSection load='6is9' size='340' side='right'caption='[[6is9]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6is9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Maize Maize]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IS9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IS9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6is9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IS9 FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Moc1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4577 MAIZE])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6is9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6is9 OCA], [http://pdbe.org/6is9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6is9 RCSB], [http://www.ebi.ac.uk/pdbsum/6is9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6is9 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6is9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6is9 OCA], [https://pdbe.org/6is9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6is9 RCSB], [https://www.ebi.ac.uk/pdbsum/6is9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6is9 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/B4FCI7_MAIZE B4FCI7_MAIZE]
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The Holliday junction (HJ) is a key intermediate during homologous recombination and DNA double-strand break repair. Timely HJ resolution by resolvases is critical for maintaining genome stability. The mechanisms underlying sequence-specific substrate recognition and cleavage by resolvases remain elusive. The monokaryotic chloroplast 1 protein (MOC1) specifically cleaves four-way DNA junctions in a sequence-specific manner. Here, we report the crystal structures of MOC1 from Zea mays, alone or bound to HJ DNA. MOC1 uses a unique beta-hairpin to embrace the DNA junction. A base-recognition motif specifically interacts with the junction center, inducing base flipping and pseudobase-pair formation at the strand-exchanging points. Structures of MOC1 bound to HJ and different metal ions support a two-metal ion catalysis mechanism. Further molecular dynamics simulations and biochemical analyses reveal a communication between specific substrate recognition and metal ion-dependent catalysis. Our study thus provides a mechanism for how a resolvase turns substrate specificity into catalytic efficiency.
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Structural basis of sequence-specific Holliday junction cleavage by MOC1.,Lin H, Zhang D, Zuo K, Yuan C, Li J, Huang M, Lin Z Nat Chem Biol. 2019 Oct 14. pii: 10.1038/s41589-019-0377-4. doi:, 10.1038/s41589-019-0377-4. PMID:31611704<ref>PMID:31611704</ref>
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==See Also==
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*[[Resolvase 3D structures|Resolvase 3D structures]]
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6is9" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Maize]]
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[[Category: Zea mays]]
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[[Category: Lin, H]]
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[[Category: Lin H]]
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[[Category: Lin, Z]]
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[[Category: Lin Z]]
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[[Category: Yuan, C]]
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[[Category: Yuan C]]
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[[Category: Zhang, D]]
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[[Category: Zhang D]]
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[[Category: Dna binding protein]]
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[[Category: Holliday junction resolvase]]
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Current revision

Crystal Structure of ZmMOC1

PDB ID 6is9

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