This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lpz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 21 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3lpz' size='340' side='right'caption='[[3lpz]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
<StructureSection load='3lpz' size='340' side='right'caption='[[3lpz]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3lpz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cbs_144.50 Cbs 144.50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LPZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3lpz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LPZ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3iqw|3iqw]], [[3iqx|3iqx]], [[2wpv|2wpv]], [[3lku|3lku]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0028730 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=209285 CBS 144.50])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpz OCA], [https://pdbe.org/3lpz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lpz RCSB], [https://www.ebi.ac.uk/pdbsum/3lpz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpz ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lpz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpz OCA], [http://pdbe.org/3lpz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lpz RCSB], [http://www.ebi.ac.uk/pdbsum/3lpz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpz ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G0S7T3_CHATD G0S7T3_CHATD]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 18: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lpz ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lpz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Tail-anchored proteins play important roles in protein translocation, membrane fusion and apoptosis. They are targeted to the endoplasmic reticulum membrane via the guided-entry of tail-anchored proteins (Get) pathway. We present the 2A crystal structure of Get4 which participates in early steps of the Get pathway. The structure shows an alpha-solenoid fold with particular deviations from the regular pairwise arrangement of alpha-helices. A conserved hydrophobic groove accommodates the flexible C-terminal region in trans. The structural organization of the Get4 helical hairpin motifs provides a scaffold for protein-protein interactions in the Get pathway.
 
- 
-
The structure of Get4 reveals an alpha-solenoid fold adapted for multiple interactions in tail-anchored protein biogenesis.,Bozkurt G, Wild K, Amlacher S, Hurt E, Dobberstein B, Sinning I FEBS Lett. 2010 Apr 16;584(8):1509-14. Epub 2010 Mar 3. PMID:20206626<ref>PMID:20206626</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 3lpz" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cbs 144 50]]
+
[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bozkurt, G]]
+
[[Category: Bozkurt G]]
-
[[Category: Sinning, I]]
+
[[Category: Sinning I]]
-
[[Category: Wild, K]]
+
[[Category: Wild K]]
-
[[Category: Get pathway]]
+
-
[[Category: Get5 binding]]
+
-
[[Category: Protein targeting]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Tail-anchored protein biogenesis]]
+

Current revision

Crystal structure of C. therm. Get4

PDB ID 3lpz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools