We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
5apa
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='5apa' size='340' side='right'caption='[[5apa]], [[Resolution|resolution]] 2.05Å' scene=''> | <StructureSection load='5apa' size='340' side='right'caption='[[5apa]], [[Resolution|resolution]] 2.05Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5apa]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5apa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rcq 3rcq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5APA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5APA FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5apa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5apa OCA], [https://pdbe.org/5apa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5apa RCSB], [https://www.ebi.ac.uk/pdbsum/5apa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5apa ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ASPH_HUMAN ASPH_HUMAN] Isoform 1: specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins.<ref>PMID:22586105</ref> Isoform 8: membrane-bound Ca(2+)-sensing protein, which is a structural component of the ER-plasma membrane junctions. Isoform 8 regulates the activity of Ca(+2) released-activated Ca(+2) (CRAC) channels in T-cells.<ref>PMID:22586105</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 26: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | + | [[Category: Allerston C]] | |
| - | [[Category: Allerston | + | [[Category: Arrowsmith CH]] |
| - | [[Category: Arrowsmith | + | [[Category: Bountra C]] |
| - | [[Category: Bountra | + | [[Category: Chaikuad A]] |
| - | [[Category: Chaikuad | + | [[Category: Edwards A]] |
| - | + | [[Category: Gileadi O]] | |
| - | [[Category: Edwards | + | [[Category: Hozjan V]] |
| - | [[Category: Gileadi | + | [[Category: Kavanagh K]] |
| - | [[Category: Hozjan | + | [[Category: Kochan G]] |
| - | [[Category: Kavanagh | + | [[Category: Krojer T]] |
| - | [[Category: Kochan | + | [[Category: McDonough MA]] |
| - | [[Category: Krojer | + | [[Category: Muniz JR]] |
| - | [[Category: McDonough | + | [[Category: Oppermann U]] |
| - | [[Category: Muniz | + | [[Category: Pfeffer I]] |
| - | [[Category: Oppermann | + | [[Category: Pilka E]] |
| - | [[Category: Pfeffer | + | [[Category: Weigelt J]] |
| - | [[Category: Pilka | + | [[Category: Von Delft F]] |
| - | [[Category: Weigelt | + | |
| - | [[Category: | + | |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of human aspartate beta-hydroxylase isoform a
| |||||||||||
Categories: Homo sapiens | Large Structures | Allerston C | Arrowsmith CH | Bountra C | Chaikuad A | Edwards A | Gileadi O | Hozjan V | Kavanagh K | Kochan G | Krojer T | McDonough MA | Muniz JR | Oppermann U | Pfeffer I | Pilka E | Weigelt J | Von Delft F
