1lw5
From Proteopedia
(Difference between revisions)
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==X-ray structure of L-Threonine Aldolase (low-specificity) in complex with glycine== | ==X-ray structure of L-Threonine Aldolase (low-specificity) in complex with glycine== | ||
- | <StructureSection load='1lw5' size='340' side='right'caption='[[1lw5]] | + | <StructureSection load='1lw5' size='340' side='right'caption='[[1lw5]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LW5 FirstGlance]. <br> |
- | </td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lw5 OCA], [https://pdbe.org/1lw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lw5 RCSB], [https://www.ebi.ac.uk/pdbsum/1lw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lw5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1lw5 TOPSAN]</span></td></tr> |
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lw5 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lw5 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | L-Threonine acetaldehyde-lyase (threonine aldolase, TA) is a pyridoxal-5'-phosphate-dependent (PLP) enzyme that catalyzes conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway. X-ray structures of Thermatoga maritima TA have been determined as the apo-enzyme at 1.8 A resolution and bound to substrate L-allo-threonine and product glycine at 1.9 and 2.0 A resolution, respectively. Despite low pairwise sequence identities, TA is a member of aspartate aminotransferase (AATase) fold family of PLP enzymes. The enzyme forms a 222 homotetramer with the PLP cofactor bound via a Schiff-base linkage to Lys199 within a domain interface. The structure reveals bound calcium and chloride ions that appear to contribute to catalysis and oligomerization, respectively. Although L-threonine and L-allo-threonine are substrates for T. maritima TA, enzymatic assays revealed a strong preference for L-allo-threonine. Structures of the external aldimines with substrate/product reveal a pair of histidines that may provide flexibility in substrate recognition. Variation in the threonine binding pocket may explain preferences for L-allo-threonine versus L-threonine among TA family members. | ||
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- | X-ray structures of threonine aldolase complexes: structural basis of substrate recognition.,Kielkopf CL, Burley SK Biochemistry. 2002 Oct 1;41(39):11711-20. PMID:12269813<ref>PMID:12269813</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1lw5" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Aldolase 3D structures|Aldolase 3D structures]] | *[[Aldolase 3D structures|Aldolase 3D structures]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Atcc 43589]] | ||
- | [[Category: L-threonine aldolase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Burley | + | [[Category: Burley SK]] |
- | [[Category: Kielkopf | + | [[Category: Kielkopf CL]] |
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Revision as of 06:49, 18 August 2021
X-ray structure of L-Threonine Aldolase (low-specificity) in complex with glycine
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