This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5kju

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='5kju' size='340' side='right'caption='[[5kju]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
<StructureSection load='5kju' size='340' side='right'caption='[[5kju]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5kju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KJU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5kju]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KJU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6TO:(3~{R},4~{S},5~{R})-3-[(~{E})-3-(4-HYDROXYPHENYL)PROP-2-ENOYL]OXY-4,5-BIS(OXIDANYL)CYCLOHEXENE-1-CARBOXYLIC+ACID'>6TO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.44&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kjs|5kjs]], [[5kjt|5kjt]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6TO:(3~{R},4~{S},5~{R})-3-[(~{E})-3-(4-HYDROXYPHENYL)PROP-2-ENOYL]OXY-4,5-BIS(OXIDANYL)CYCLOHEXENE-1-CARBOXYLIC+ACID'>6TO</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HST, HCT, At5g48930, K19E20.4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kju OCA], [https://pdbe.org/5kju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kju RCSB], [https://www.ebi.ac.uk/pdbsum/5kju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kju ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Shikimate_O-hydroxycinnamoyltransferase Shikimate O-hydroxycinnamoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.133 2.3.1.133] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kju OCA], [http://pdbe.org/5kju PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kju RCSB], [http://www.ebi.ac.uk/pdbsum/5kju PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kju ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HST_ARATH HST_ARATH]] Acyltransferase involved in the biosynthesis of lignin. Accepts caffeoyl-CoA and p-coumaroyl-CoA as substrates and transfers the acyl group on both shikimate and quinate acceptors.<ref>PMID:15161961</ref>
+
[https://www.uniprot.org/uniprot/HST_ARATH HST_ARATH] Acyltransferase involved in the biosynthesis of lignin. Accepts caffeoyl-CoA and p-coumaroyl-CoA as substrates and transfers the acyl group on both shikimate and quinate acceptors.<ref>PMID:15161961</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arath]]
+
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Shikimate O-hydroxycinnamoyltransferase]]
+
[[Category: Chiang YC]]
-
[[Category: Chiang, Y C]]
+
[[Category: Levsh O]]
-
[[Category: Levsh, O]]
+
[[Category: Noel JP]]
-
[[Category: Noel, J P]]
+
[[Category: Tung CF]]
-
[[Category: Tung, C F]]
+
[[Category: Wang Y]]
-
[[Category: Wang, Y]]
+
[[Category: Weng JK]]
-
[[Category: Weng, J K]]
+
-
[[Category: Acyltransferase]]
+
-
[[Category: Bahd]]
+
-
[[Category: Phenylpropanoid metabolism]]
+
-
[[Category: Transferase]]
+

Revision as of 10:47, 27 September 2023

Crystal structure of Arabidopsis thaliana HCT in complex with p-coumaroylshikimate

PDB ID 5kju

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5kju"
Personal tools