Sandbox Reserved 1584
From Proteopedia
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This protein catalyzes the hydrolysis of a large number of penicillins, cephalosporins, and almost all β-lactams. It hydrolyse carbapenems efficiently, while it usually escapes the activity of the active-site serine enzymes. This can be threatening to the way we fight diseases, because the gene is most likely to be plasmid-borne, which would make it easy to spread to other populations of pathogenic species. | This protein catalyzes the hydrolysis of a large number of penicillins, cephalosporins, and almost all β-lactams. It hydrolyse carbapenems efficiently, while it usually escapes the activity of the active-site serine enzymes. This can be threatening to the way we fight diseases, because the gene is most likely to be plasmid-borne, which would make it easy to spread to other populations of pathogenic species. | ||
== Structure == | == Structure == | ||
- | The polypeptide chain is divided into two domains made up of beta-sheets and alpha-helices in the following order:β1 β2 β3 β4 β5 α1 β6 α2 β7 α3 and β8 β9 β10 β11 α4 β12 α5 going from N to C terminals. α2 has two glycine residues on 93 and 94, which causes a kink. The core is formed by two β-sheets surrounded by five helices. This is the αββα sandwich, which is the keystone to the protein. The β-sheets have a twist which is typical to most proteins. They can be superimposed on β2 to β6 and β8 to β12 by a 2-fold rotation. The ββ sandwich fold is similar to DNase I and the folds has no similarity with any known metalloprotein structure. Including D-alanine-D-alanine carboxypeptidase, which also fights antibiotics including penicillin. | + | The polypeptide chain is divided into two domains made up of beta-sheets and alpha-helices in the following order:β1 β2 β3 β4 β5 α1 β6 α2 β7 α3 and β8 β9 β10 β11 α4 β12 α5 going from N to C terminals. α2 has two glycine residues on 93 and 94, which causes a kink. The core is formed by two β-sheets surrounded by five helices. This is the αββα sandwich(<scene name='82/824629/Alpha_beta_sandwich/1'>TextToBeDisplayed</scene>), which is the keystone to the protein. The β-sheets have a twist which is typical to most proteins. They can be superimposed on β2 to β6 and β8 to β12 by a 2-fold rotation. The ββ sandwich fold is similar to DNase I and the folds has no similarity with any known metalloprotein structure. Including D-alanine-D-alanine carboxypeptidase, which also fights antibiotics including penicillin. |
Revision as of 23:33, 29 November 2019
This Sandbox is Reserved from September 14, 2021, through May 31, 2022, for use in the class Introduction to Biochemistry taught by User:John Means at the University of Rio Grande, Rio Grande, OH, USA. This reservation includes 5 reserved sandboxes (Sandbox Reserved 1590 through Sandbox Reserved 1594). |
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More help: Help:Editing. For an example of a student Proteopedia page, please see Photosystem II, Tetanospasmin, or Guanine riboswitch. |
Zinc Metallo-Beta-Lactamase
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Carfi A, Pares S, Duee E, Galleni M, Duez C, Frere JM, Dideberg O. The 3-D structure of a zinc metallo-beta-lactamase from Bacillus cereus reveals a new type of protein fold. EMBO J. 1995 Oct 16;14(20):4914-21. PMID:7588620