This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5j32

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:43, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5j32' size='340' side='right'caption='[[5j32]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
<StructureSection load='5j32' size='340' side='right'caption='[[5j32]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5j32]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J32 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J32 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5j32]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J32 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J32 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IPM:3-ISOPROPYLMALIC+ACID'>IPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.933&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">IMDH2, IMDH, At1g80560, T21F11.11 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IPM:3-ISOPROPYLMALIC+ACID'>IPM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-isopropylmalate_dehydrogenase 3-isopropylmalate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.85 1.1.1.85] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j32 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j32 OCA], [https://pdbe.org/5j32 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j32 RCSB], [https://www.ebi.ac.uk/pdbsum/5j32 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j32 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j32 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j32 OCA], [http://pdbe.org/5j32 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j32 RCSB], [http://www.ebi.ac.uk/pdbsum/5j32 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j32 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LEU32_ARATH LEU32_ARATH]] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
+
[https://www.uniprot.org/uniprot/LEU32_ARATH LEU32_ARATH] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 3-isopropylmalate dehydrogenase]]
+
[[Category: Arabidopsis thaliana]]
-
[[Category: Arath]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jez, J M]]
+
[[Category: Jez JM]]
-
[[Category: Lee, S G]]
+
[[Category: Lee SG]]
-
[[Category: Dehydrogenase]]
+
-
[[Category: Glucosinolate biosynthesis]]
+
-
[[Category: Leucine biosynthesis]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Isopropylmalate dehydrogenase in complex with isopropylmalate

PDB ID 5j32

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5j32"
Personal tools