This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5usw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:33, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5usw' size='340' side='right'caption='[[5usw]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
<StructureSection load='5usw' size='340' side='right'caption='[[5usw]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5usw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Alif1 Alif1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5USW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5USW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5usw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aliivibrio_fischeri_ES114 Aliivibrio fischeri ES114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5USW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5USW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.643&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">folP, VF_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=312309 ALIF1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5usw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5usw OCA], [https://pdbe.org/5usw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5usw RCSB], [https://www.ebi.ac.uk/pdbsum/5usw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5usw ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydropteroate_synthase Dihydropteroate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.15 2.5.1.15] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5usw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5usw OCA], [http://pdbe.org/5usw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5usw RCSB], [http://www.ebi.ac.uk/pdbsum/5usw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5usw ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q5E7M1_VIBF1 Q5E7M1_VIBF1]] Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.[RuleBase:RU361205]
+
[https://www.uniprot.org/uniprot/Q5E7M1_ALIF1 Q5E7M1_ALIF1] Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.[RuleBase:RU361205]
==See Also==
==See Also==
Line 17: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Alif1]]
+
[[Category: Aliivibrio fischeri ES114]]
-
[[Category: Dihydropteroate synthase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Tan K]]
-
[[Category: Tan, K]]
+
[[Category: Zhou M]]
-
[[Category: Zhou, M]]
+
-
[[Category: 8-dihydropteroate synthase]]
+
-
[[Category: Csgid]]
+
-
[[Category: Transferase]]
+

Current revision

The crystal structure of 7,8-dihydropteroate synthase from Vibrio fischeri ES114

PDB ID 5usw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools