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5uug

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Current revision (13:34, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5uug' size='340' side='right'caption='[[5uug]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
<StructureSection load='5uug' size='340' side='right'caption='[[5uug]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5uug]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14579 Atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UUG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UUG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5uug]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UUG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UUG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=YTA:yatakemycin-adenine+nucleobase+adduct'>YTA</scene>, <scene name='pdbligand=ORP:2-DEOXY-5-PHOSPHONO-RIBOSE'>ORP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.712&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5uuf|5uuf]], [[5uuh|5uuh]], [[5uuj|5uuj]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ORP:2-DEOXY-5-PHOSPHONO-RIBOSE'>ORP</scene>, <scene name='pdbligand=YTA:yatakemycin-adenine+nucleobase+adduct'>YTA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bcere0015_46090 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1396 ATCC 14579])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uug FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uug OCA], [https://pdbe.org/5uug PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uug RCSB], [https://www.ebi.ac.uk/pdbsum/5uug PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uug ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5uug FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uug OCA], [http://pdbe.org/5uug PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5uug RCSB], [http://www.ebi.ac.uk/pdbsum/5uug PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5uug ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q816E8_BACCR Q816E8_BACCR]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 14579]]
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[[Category: Bacillus cereus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Eichman, B F]]
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[[Category: Synthetic construct]]
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[[Category: Mullins, E A]]
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[[Category: Eichman BF]]
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[[Category: Alkylpurine]]
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[[Category: Mullins EA]]
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[[Category: Bulky lesion]]
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[[Category: Dna glycosylase]]
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[[Category: Hydrolase-dna-antibiotic complex]]
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[[Category: Protein-dna complex]]
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Current revision

Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing an abasic site (9-mer product complex)

PDB ID 5uug

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